Publications

Sort by: Author [ Title  (Asc)] Type Year
A B C D E [F] G H I J K L M N O P Q R S T U V W X Y Z   [Show ALL]
E
Bernacka-Wojcik, Iwona, Susana Ribeiro, Pawel Jerzy Wojcik, Pedro Urbano Alves, Tito Busani, Elvira Fortunato, Pedro Viana Baptista, José António Covas, Hugo Águas, Loic Hilliou, and Rodrigo Martins. " Experimental optimization of a passive planar rhombic micromixer with obstacles for effective mixing in a short channel length." RSC ADVANCES 4 (2014). AbstractWebsite

This paper presents the performance of a passive planar rhombic micromixer with diamond-shaped obstacles and a rectangular contraction between the rhombi. The device was experimentally optimized using water for high mixing efficiency and a low pressure drop over a wide range of Reynolds numbers (Re = 0.1–117.6) by varying geometrical parameters such as the number of rhombi, the distance between obstacles and the contraction width. Due to the large amount of data generated, statistical methods were used to facilitate and improve the results of the analysis. The results revealed a rank of factors influencing mixing efficiency: Reynolds number > number of rhombi > contraction width > inter-obstacles distance. The pressure drop measured after three rhombi depends mainly on Re and inter-obstacle distance. The resulting optimum geometry for the low Re regime has a contraction width of 101 μm and inter-obstacles distance of 93 μm, while for the high Re regime a contraction width of 400 μm and inter-obstacle distance of 121 μm are more appropriate. These mixers enabled 80% mixing efficiency creating a pressure drop of 6.0 Pa at Re = 0.1 and 5.1 × 104 Pa at Re = 117.6, with a mixer length of 2.5 mm. To the authors' knowledge, the developed mixer is one of the shortest planar passive micromixers reported to date.

A
Carlos, F. F., B. Veigas, A. S. Matias, G. Doria, O. Flores, and P. V. Baptista. "Allele specific LAMP- gold nanoparticle for characterization of single nucleotide polymorphisms." Biotechnol Rep (Amst) 16 (2017): 21-25. AbstractWebsite

n/a

Martins, Rodrigo, Pedro Baptista, Leandro Raniero, Gonçalo Doria, Leonardo Silva, Ricardo Franco, and Elvira Fortunato. "Amorphous/nanocrystalline silicon biosensor for the specific identification of unamplified nucleic acid sequences using gold nanoparticle probes." Appl. Phys. Lett. 90 (2007).
Veigas, B., A. Matias, T. Calmeiro, E. Fortunato, A. R. Fernandes, and P. V. Baptista. "Antibody modified gold nanoparticles for fast colorimetric screening of rheumatoid arthritis." Analyst 144 (2019): 3613-3619. AbstractWebsite

n/a

Kordestani, N., H. A. Rudbari, A. R. Fernandes, L. R. Raposo, P. V. Baptista, D. Ferreira, G. Bruno, G. Bella, R. Scopelliti, J. D. Braun, D. E. Herbert, and O. Blacque. "Antiproliferative Activities of Diimine-Based Mixed Ligand Copper(II) Complexes." ACS Comb Sci 22 (2020): 89-99. AbstractWebsite

n/a

Sutradhar, M., E. C. B. A. Alegria, F. Ferretti, L. R. Raposo, M. F. C. Guedes da Silva, P. V. Baptista, A. R. Fernandes, and A. J. L. Pombeiro. "Antiproliferative activity of heterometallic sodium and potassium-dioxidovanadium(V) polymers." J Inorg Biochem 200 (2019): 110811. AbstractWebsite

n/a

Carlos, F. F., J. Silva-Nunes, O. Flores, M. Brito, G. Doria, L. Veiga, and P. V. Baptista. "Association of FTO and PPARG polymorphisms with obesity in Portuguese women." Diabetes Metab Syndr Obes 6 (2013): 241-5. AbstractWebsite

n/a

Carlos, Fabio Ferreira, Jose Silva-Nunes, Orfeu Flores, Miguel Brito, Goncalo Doria, Luisa Veiga, and Pedro Viana Baptista. "Association of FTO and PPARG polymorphisms with obesity in Portuguese women." Diabetes, metabolic syndrome and obesity : targets and therapy 6 (2013): 241-5. Abstract

n/a

Doria, G., J. T. Dias, M. Larguinho, E. Pereira, R. Franco, and P. Baptista. AuAg-alloy-nanoprobes for Specific Nucleic Acid Detection In NSTI-Nanotech 2010. Anaheim, CA, 2010.
Veigas, Bruno, Alexandra R. Fernandes, and Pedro V. Baptista. "AuNPs for identification of molecular signatures of resistance." Frontiers in Microbiology 5 (2014). Abstract

n/a

B
Bernacka-Wojcik, Iwona, Paulo Lopes, Ana Catarina Vaz, Bruno Veigas, Pawel Jerzy Wojcik, Pedro Simões, David Barata, Elvira Fortunato, Pedro V. Baptista, Hugo Águas, and Rodrigo Martins. "Bio-microfluidic platform for gold nanoprobe based DNA detection—application to Mycobacterium tuberculosis." Biosens Bioelectron 48 (2013): 87-93. AbstractWebsite

We have projected and fabricated a microfluidic platform for DNA sensing that makes use of an optical colorimetric detection method based on gold nanoparticles. The platform was fabricated using replica moulding technology in PDMS patterned by high-aspect-ratio SU-8 moulds. Biochips of various geometries were tested and evaluated in order to find out the most efficient architecture, and the rational for design, microfabrication and detection performance is presented. The best biochip configuration has been successfully applied to the DNA detection of Mycobacterium tuberculosis using only 3 µl on DNA solution (i.e. 90 ng of target DNA), therefore a 20-fold reduction of reagents volume is obtained when compared with the actual state of the art.

C
Mendo, Ana Soraia, Sara Figueiredo, Catarina Roma-Rodrigues, Paula A. Videira, Zhen Ma, Mário Diniz, Miguel Larguinho, Pedro Costa, João C. Lima, Armando J. L. Pombeiro, Pedro V. Baptista, and Alexandra R. Fernandes. "Characterization of antiproliferative potential and biological targets of a copper compound containing 4'-phenyl terpyridine." JBIC Journal of Biological Inorganic Chemistry 2 (2015): 935-948. AbstractWebsite

Several copper complexes have been assessed as anti-tumor agents against cancer cells. In this work, a copper compound [Cu(H2O){OS(CH3)2}L](NO3)2 incorporating the ligand 4'-phenyl-terpyridine antiproliferative activity against human colorectal, hepatocellular carcinomas and breast adenocarcinoma cell lines was determined, demonstrating high cytotoxicity. The compound is able to induce apoptosis and a slight delay in cancer cell cycle progression, probably by its interaction with DNA and induction of double-strand pDNA cleavage, which is enhanced by oxidative mechanisms. Moreover, proteomic studies indicate that the compound induces alterations in proteins involved in cytoskeleton maintenance, cell cycle progression and apoptosis, corroborating its antiproliferative potential.

Carlos, Fábio Ferreira, Orfeu Flores, Gonçalo Doria, and Pedro Viana Baptista. "Characterization of genomic SNP via colorimetric detection using a single gold nanoprobe." Analytical Biochemistry 465 (2014): 1-5. AbstractWebsite

Identification of specific nucleic acid sequences mediated by gold nanoparticles derivatized thiol-modified oligonucleotides (Au-nanoprobes) has been proven to be a useful tool in molecular diagnostics. Here, we demonstrate that, on optimization, detection may be simplified via the use of a single Au-nanoprobe to detect a single nucleotide polymorphism (SNP) in homo- or heterozygote condition. We validated this non-cross-linking approach through the analysis of 20 clinical samples using a single specific Au-nanoprobe for an SNP in the FTO (fat mass and obesity-associated) gene against direct DNA sequencing. Sensitivity, specificity, and limit of detection (LOD) were determined, and statistical differences were calculated by one-way analysis of variance (ANOVA) and a post hoc Tukey's test to ascertain whether there were any differences between Au-nanoprobe genotyped groups. For the first time, we show that the use of a single Au-nanoprobe can detect SNP for each genetic status (wild type, heterozygous, or mutant) with high degrees of sensitivity (87.50%) and specificity (91.67%).

Vinhas, Raquel, Claudia Correia, Patricia Ribeiro, Alexandra Lourenco, Aida Botelho de Sousa, Alexandra R. Fernandes, and Pedro V. Baptista. "Colorimetric assessment of BCR-ABL1 transcripts in clinical samples via gold nanoprobes." Analytical and Bioanalytical Chemistry 408 (2016): 5277-5284. Abstract

n/a

Baptista, P., G. Doria, D. Henriques, E. Pereira, and R. Franco. "Colorimetric detection of eukaryotic gene expression with DNA-derivatized gold nanoparticles." Journal of Biotechnology 119 (2005): 111-117. Abstract

n/a

Pedrosa, Pedro, Rita Mendes, Rita Cabral, Luisa M. D. R. S. Martins, Pedro V. Baptista, and Alexandra R. Fernandes. "Combination of chemotherapy and Au-nanoparticle photothermy in the visible light to tackle doxorubicin resistance in cancer cells." Scientific Reports 8 (2018). Abstract

n/a

FLOMEN, R., PB BAPTISTA, CH JAMES, and al.et. "Construction of a YAC/PAC physical map of a gene rich region in 1p13.3." EUROPEAN JOURNAL OF HUMAN GENETICS 6 (1998): 168. Abstract

n/a

Roma-Rodrigues, C., A. R. Fernandes, and P. V. Baptista. "Counteracting the effect of leukemia exosomes by antiangiogenic gold nanoparticles." Int J Nanomedicine 14 (2019): 6843-6854. AbstractWebsite

n/a

Vinhas, Raquel, Milton Cordeiro, Pedro Pedrosa, Alexandra R. Fernandes, and Pedro V. Baptista. "Current trends in molecular diagnostics of chronic myeloid leukemia." Leukemia & Lymphoma (2016): 1-14. AbstractWebsite

Nearly 1.5 million people worldwide suffer from chronic myeloid leukemia (CML), characterized by the genetic translocation t(9;22)(q34;q11.2), involving the fusion of the Abelson oncogene (ABL1) with the breakpoint cluster region (BCR) gene. Early onset diagnosis coupled to current therapeutics allow for a treatment success rate of 90, which has focused research on the development of novel diagnostics approaches. In this review, we present a critical perspective on current strategies for CML diagnostics, comparing to gold standard methodologies and with an eye on the future trends on nanotheranostics.

D
Conde, Joao, Alfredo Ambrosone, Vanesa Sanz, Yulan Hernandez, Valentina Marchesano, Furong Tian, Hannah Child, Catherine C. Berry, Ricardo M. Ibarra, Pedro V. Baptista, Claudia Tortiglione, and Jesus M. de la Fuente. "Design of Multifunctional Gold Nanoparticles for In Vitro and In Vivo Gene Silencing." Acs Nano 6 (2012): 8316-8324. Abstract

n/a

Conde, J., A. Ambrosone, Y. Hernandez, V. Marchesano, F. Tian, M. Ricardo Ibarra, P. V. Baptista, C. Tortiglione, and J. M. de la Fuente. "Designing gold nanoparticles for in vivo gene silencing as a new therapeutic tool." Human Gene Therapy 24 (2013): A24. Abstract

n/a

Coelho, Beatriz, Bruno Veigas, Elvira Fortunato, Rodrigo Martins, Hugo Aguas, Rui Igreja, and Pedro V. Baptista. "Digital Microfluidics for Nucleic Acid Amplification." Sensors 17 (2017). Abstract

n/a

Coelho, Beatriz Jorge, Bruno Veigas, Hugo Aguas, Elvira Fortunato, Rodrigo Martins, Pedro Viana Baptista, and Rui Igreja. "A Digital Microfluidics Platform for Loop-Mediated Isothermal Amplification Detection." Sensors 17 (2017). Abstract

n/a

Vinhas, Raquel, Alexandra Lourenco, Susana Santos, Patricia Ribeiro, Madalena Silva, Aida Botelho de Sousa, Pedro V. Baptista, and Alexandra R. Fernandes. "A double Philadelphia chromosome-positive chronic myeloid leukemia patient, co-expressing P210(BCR-ABL1) and P195(BCR-ABL1) isoforms." Haematologica 103 (2018): E549-E552. Abstract

n/a