Publications

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Journal Article
Conde, João, Miguel Larguinho, Ana Cordeiro, Luis R. Raposo, Pedro M. Costa, Susana Santos, Mário Diniz, Alexandra R. Fernandes, and Pedro Viana Baptista. "Gold-Nanobeacons for gene therapy: evaluation of genotoxicity, cell toxicity and proteome profiling analysis." Nanotoxicology 8 (2014): 521-532. AbstractWebsite

Antisense therapy is a powerful tool for post-transcriptional gene silencing suitable for down-regulating target genes associated to disease. Gold nanoparticles have been described as effective intracellular delivery vehicles for antisense oligonucleotides providing increased protection against nucleases and targeting capability via simple surface modification. We constructed an antisense gold-nanobeacon consisting of a stem-looped oligonucleotide double-labelled with 3′-Cy3 and 5′-Thiol-C6 and tested for the effective blocking of gene expression in colorectal cancer cells. Due to the beacon conformation, gene silencing was directly detected as fluorescence increases with hybridisation to target, which can be used to assess the level of silencing. Moreover, this system was extensively evaluated for the genotoxic, cytotoxic and proteomic effects of gold-nanobeacon exposure to cancer cells. The exposure was evaluated by two-dimensional protein electrophoresis followed by mass spectrometry to perform a proteomic profile and 3-(4,5-Dimethylthiazol-2-Yl)-2,5-Diphenyltetrazolium Bromide (MTT) assay, glutathione-S-transferase assay, micronucleus test and comet assay to assess the genotoxicity. This integrated toxicology evaluation showed that the proposed nanotheranostics strategy does not exhibit significant toxicity, which is extremely relevant when translating into in vivo systems.

Rosa, J., J. Conde, J. M. de la Fuente, J. C. Lima, and P. V. Baptista. "Gold-nanobeacons for real-time monitoring of RNA synthesis." Biosens Bioelectron 36 (2012): 161-7. AbstractWebsite

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Conde, João, João Rosa, Jesús M. de la Fuente, and Pedro V. Baptista. "Gold-nanobeacons for simultaneous gene specific silencing and intracellular tracking of the silencing events." Biomaterials 34 (2013): 2516-2523.
Larguinho, Miguel, Pedro M. Costa, Gonçalo Sousa, Maria H. Costa, Mário S. Diniz, and Pedro V. Baptista. "Histopathological findings on Carassius auratus hepatopancreas upon exposure to acrylamide: correlation with genotoxicity and metabolic alterations." Journal of Applied Toxicology 34 (2014).
Raposo, L. R., C. Roma-Rodrigues, P. Faisca, M. Alves, J. Henriques, MC Carvalheiro, M. L. Corvo, P. V. Baptista, A. J. Pombeiro, and A. R. Fernandes. "Immortalization and characterization of a new canine mammary tumour cell line FR37-CMT." Veterinary and Comparative Oncology 15 (2017): 952-967. Abstract

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Martins, Marta, Pedro V. Baptista, Ana Soraia Mendo, Claudia Correia, Paula Videira, Antonio S. Rodrigues, J. Muthukumaran, Teresa Santos-Silva, Ana Silva, Fatima M. C. Guedes da Silva, Joana Gigante, Antonio Duarte, Malgorzata Gajewska, and Alexandra R. Fernandes. "In vitro and in vivo biological characterization of the anti-proliferative potential of a cyclic trinuclear organotin(IV) complex." Molecular Biosystems 12 (2016): 1015-1023. Abstract

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Conde, J., J. M. de la Fuente, and P. V. Baptista. "In vitro transcription and translation inhibition via DNA functionalized gold-nanoparticles." Nanotechnology 21 (2010): 505101.
Conde, Joao, Furong Tian, Yulan Hernandez, Chenchen Bao, Daxiang Cui, Klaus-Peter Janssen, M. Ricardo Ibarra, Pedro V. Baptista, Tobias Stoeger, and Jesus M. de la Fuente. "In vivo tumor targeting via nanoparticle-mediated therapeutic siRNA coupled to inflammatory response in lung cancer mouse models." Biomaterials 34 (2013): 7744-7753. Abstract

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Roma-Rodrigues, Catarina, Cynthia Alves-Barroco, Luis R. Raposo, Mafalda N. Costa, Elvira Fortunato, Pedro Viana Baptista, Alexandra R. Fernandes, and Ilda Santos-Sanches. "Infection of human keratinocytes by Streptococcus dysgalactiae subspecies dysgalactiae isolated from milk of the bovine udder." Microbes and Infection 18 (2016): 290-293. Abstract

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Beola, L., L. Asín, C. Roma-Rodrigues, Y. Fernández-Afonso, R. M. Fratila, D. Serantes, S. Ruta, R. W. Chantrell, A. R. Fernandes, P. V. Baptista, J. M. de la Fuente, V. Grazú, and L. Gutiérrez. "The Intracellular Number of Magnetic Nanoparticles Modulates the Apoptotic Death Pathway after Magnetic Hyperthermia Treatment." ACS Appl Mater Interfaces 12 (2020): 43474-43487. AbstractWebsite

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Santos, Miguel M., Luís R. Raposo, Gonçalo V. S. M. Carrera, Alexandra Costa, Madalena Dionísio, Pedro V. Baptista, Alexandra R. Fernandes, and Luís C. Branco. "Ionic Liquids and Salts from Ibuprofen as Promising Innovative Formulations of an Old Drug." ChemMedChem 14 (2019): 907-911. AbstractWebsite

Abstract Herein we report the synthesis of novel ionic liquids (ILs) and organic salts by combining ibuprofen as anion with ammonium, imidazolium, or pyridinium cations. The methodology consists of an acid–base reaction of neutral ibuprofen with cation hydroxides, which were previously prepared by anion exchange from the corresponding halide salts with Amberlyst A-26(OH). In comparison with the parent drug, these organic salts display higher solubility in water and biological fluids and a smaller degree of polymorphism, which in some cases was completely eliminated. With the exception of [C16Pyr][Ibu] and [N1,1,2,2OH1][Ibu], the prepared salts did not affect the viability of normal human dermal fibroblasts or ovarian carcinoma (A2780) cells. Therefore, these ibuprofen-based ionic liquids may be very promising lead candidates for the development of effective formulations of this drug.

Veigas, Bruno, Pedro Pedrosa, Isabel Couto, Miguel Viveiros, and Pedro V. Baptista. "Isothermal DNA amplification coupled to Au-nanoprobes for detection of mutations associated to Rifampicin resistance in Mycobacterium tuberculosis." Journal of Nanobiotechnology (2013).
Veigas, B., P. Pedrosa, I. Couto, M. Viveiros, and P. V. Baptista. "Isothermal DNA amplification coupled to Au-nanoprobes for detection of mutations associated to Rifampicin resistance in Mycobacterium tuberculosis." J Nanobiotechnology 11 (2013): 38. AbstractWebsite

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Veigas, Bruno, Pedro Pedrosa, Isabel Couto, Miguel Viveiros, and Pedro V. Baptista. "Isothermal DNA amplification coupled to Aunanoprobes for detection of mutations associated to Rifampicin resistance in Mycobacterium tuberculosis." Journal of Nanobiotechnology 11 (2013). Abstract

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Corvo, Luísa M., Ana Soraia Mendo, Sara Figueiredo, Rogério Gaspar, Miguel Larguinho, Fátima Guedes M. C. da Silva, Pedro Viana Baptista, and Alexandra R. Fernandes. "Liposomes as Delivery System of a Sn(IV) Complex for Cancer Therapy." Pharmaceutical Research (2016).
Costa, Mafalda, Bruno Veigas, Jorge Jacob, David Santos, Jacinto Gomes, Pedro V. Baptista, Rodrigo Martins, João Inácio, and Elvira Fortunato. "Low cost, safe, disposable, rapid and self-sustainable paper-based platform for diagnostic testing - Lab-on-Paper." NANOTECHNOLOGY 9 (2014): 094006. AbstractWebsite

There is a strong interest in the use of biopolymers in the electronic and biomedical industries, mainly towards low-cost applications. The possibility of developing entirely new kinds of products based on cellulose is of current interest, in order to enhance and to add new functionalities to conventional paper-based products. We present our results towards the development of paper-based microfluidics for molecular diagnostic testing. Paper properties were evaluated and compared to nitrocellulose, the most commonly used material in lateral flow and other rapid tests. Focusing on the use of paper as a substrate for microfluidic applications, through an eco-friendly wax-printing technology, we present three main and distinct colorimetric approaches: (i) enzymatic reactions (glucose detection); (ii) immunoassays (antibodies anti-Leishmania detection); (iii) nucleic acid sequence identification (Mycobacterium tuberculosis complex detection). Colorimetric glucose quantification was achieved through enzymatic reactions performed within specific zones of the paper-based device. The colouration achieved increased with growing glucose concentration and was highly homogeneous, covering all the surface of the paper reaction zones in a 3D sensor format. These devices showed a major advantage when compared to the 2D lateral flow glucose sensors, where some carryover of the coloured products usually occurs. The detection of anti-Leishmania antibodies in canine sera was conceptually achieved using a paper-based 96-well enzyme-linked immunosorbent assay format. However, optimization is still needed for this test, regarding the efficiency of the immobilization of antigens on the cellulose fibres. The detection of Mycobacterium tuberculosis nucleic acids integrated with a non-cross-linking gold nanoprobe detection scheme was also achieved in a wax-printed 384-well paper-based microplate, by the hybridization with a species-specific probe. The obtained results with the above-mentioned proof-of-concept sensors are thus promising towards the future development of simple and cost-effective paper-based diagnostic devices.

Costa, M. N., B. Veigas, J. M. Jacob, D. S. Santos, J. Gomes, P. V. Baptista, R. Martins, J. Inacio, and E. Fortunato. "A low cost, safe, disposable, rapid and self-sustainable paper-based platform for diagnostic testing: lab-on-paper." Nanotechnology 25 (2014). Abstract

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Larguinho, Miguel, Ana Cordeiro, Mario S. Diniz, Pedro M. Costa, and Pedro V. Baptista. "Metabolic and histopathological alterations in the marine bivalve Mytilus galloprovincialis induced by chronic exposure to acrylamide." Environmental Research 135 (2014): 55-62. Abstract

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Conde, João, Pedro V. Baptista, Yulan Hernández, Vanesa Sanz, and Jesus M. de la Fuente. "Modification of plasmid DNA topology by ‘histone-mimetic’ gold nanoparticles." Nanomedicine (2012).
Sanz, Vanesa, Joao Conde, Alfredo Ambrosone, Yulan Hernandez, Valentina Marchesasno, Giovani G. Estrada, Manuel R. Ibarra, Pedro V. Baptista, Furong Tian, Claudia Tortiglione, and Jesus M. de la Fuente. "Multifunctional gold nanoparticles for gene silencing." Abstracts of Papers of the American Chemical Society 243 (2012). Abstract

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Fernandes, Alexandra R., Joao Jesus, Pedro Martins, Sara Figueiredo, Daniela Rosa, Luisa M. R. D. R. S. Martins, Maria Luisa Corvo, Manuela C. Carvalheiro, Pedro M. Costa, and Pedro V. Baptista. "Multifunctional gold-nanoparticles: A nanovectorization tool for the targeted delivery of novel chemotherapeutic agents." Journal of Controlled Release 245 (2017): 52-61. Abstract

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Baptista, Pedro V., Matthew P. McCusker, Andreia Carvalho, Daniela A. Ferreira, Niamh M. Mohan, Marta Martins, and Alexandra R. Fernandes. "Nano-Strategies to Fight Multidrug Resistant Bacteria—“A Battle of the Titans”." Frontiers in Microbiology 9 (2018): 1441. AbstractWebsite

Infectious diseases remain one of the leading causes of morbidity and mortality worldwide. The WHO and CDC have expressed serious concern regarding the continued increase in the development of multidrug resistance among bacteria. Therefore, the antibiotic resistance crisis is one of the most pressing issues in global public health. Associated with the rise in antibiotic resistance is the lack of new antimicrobials. This has triggered initiatives worldwide to develop novel and more effective antimicrobial compounds as well as to develop novel delivery and targeting strategies. Bacteria have developed many ways by which they become resistant to antimicrobials. Among those are enzyme inactivation, decreased cell permeability, target protection, target overproduction, altered target site/enzyme, increased efflux due to over-expression of efflux pumps, among others. Other more complex phenotypes, such as biofilm formation and quorum sensing do not appear as a result of the exposure of bacteria to antibiotics although, it is known that biofilm formation can be induced by antibiotics. These phenotypes are related to tolerance to antibiotics in bacteria. Different strategies, such as the use of nanostructured materials, are being developed to overcome these and other types of resistance. Nanostructured materials can be used to convey antimicrobials, to assist in the delivery of novel drugs or ultimately, possess antimicrobial activity by themselves. Additionally, nanoparticles (e.g., metallic, organic, carbon nanotubes, etc.) may circumvent drug resistance mechanisms in bacteria and, associated with their antimicrobial potential, inhibit biofilm formation or other important processes. Other strategies, including the combined use of plant-based antimicrobials and nanoparticles to overcome toxicity issues, are also being investigated. Coupling nanoparticles and natural-based antimicrobials (or other repurposed compounds) to inhibit the activity of bacterial efflux pumps; formation of biofilms; interference of quorum sensing; and possibly plasmid curing, are just some of the strategies to combat multidrug resistant bacteria. However, the use of nanoparticles still presents a challenge to therapy and much more research is needed in order to overcome this. In this review, we will summarize the current research on nanoparticles and other nanomaterials and how these are or can be applied in the future to fight multidrug resistant bacteria.

Conde, João, Jesus M. de la Fuente, and Pedro V. Baptista. "Nanomaterials for reversion of multidrug resistance in cancer: a new hope for an old idea?" Front. Pharmacol. (2013).
Conde, J., J. M. de la Fuente, and P. V. Baptista. "Nanomaterials for reversion of multidrug resistance in cancer: a new hope for an old idea?" Front Pharmacol 4 (2013): 134. AbstractWebsite

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Conde, Joao, Jesus M. de la Fuente, and Pedro V. Baptista. "Nanomaterials for reversion of multidrug resistance in cancer: a new hope for an old idea?" Frontiers in Pharmacology 4 (2013). Abstract

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