Publications

Export 207 results:
Sort by: Author [ Title  (Desc)] Type Year
A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 
D
Brás, JLA, Pinheiro BA, Cameron K, Cuskin F, Viegas A, Najmudin S, Bule P, Pires VMR, Romão MJ, Bayer EA, Spencer HL, Smith S, Gilbert HJ, Alves VD, Carvalho AL, Fontes CMGA.  2016.  Diverse specificity of cellulosome attachment to the bacterial cell surface, dec. Scientific Reports. 6:38292.: The Author(s) AbstractWebsite

During the course of evolution, the cellulosome, one of Nature's most intricate multi-enzyme complexes, has been continuously fine-tuned to efficiently deconstruct recalcitrant carbohydrates. To facilitate the uptake of released sugars, anaerobic bacteria use highly ordered protein-protein interactions to recruit these nanomachines to the cell surface. Dockerin modules located within a non-catalytic macromolecular scaffold, whose primary role is to assemble cellulosomal enzymatic subunits, bind cohesin modules of cell envelope proteins, thereby anchoring the cellulosome onto the bacterial cell. Here we have elucidated the unique molecular mechanisms used by anaerobic bacteria for cellulosome cellular attachment. The structure and biochemical analysis of five cohesin-dockerin complexes revealed that cell surface dockerins contain two cohesin-binding interfaces, which can present different or identical specificities. In contrast to the current static model, we propose that dockerins utilize multivalent modes of cohesin recognition to recruit cellulosomes to the cell surface, a mechanism that maximises substrate access while facilitating complex assembly.

dos Santos, MMC, Sousa PMP, Goncalves MLS, Romao MJ, Moura I, Moura JJG.  2004.  Direct electrochemistry of the Desulfovibrio gigas aldehyde oxidoreductase. European Journal of Biochemistry. 271:1329-1338., Number 7 AbstractWebsite
n/a
Mukhopadhyay, A, Bursakov SA, Ramos JL, Wittich RM, Kladova AV, Romao MJ, van Dillewijn P, Carvalho AL.  2013.  Determinants of selective group reduction in the TNT-bound xenobiotic reductase B from P. putida. European Biophysics Journal with Biophysics Letters. 42:S179-S179. AbstractWebsite
n/a
Palma, AS, Liu Y, Zhang Y, Zhang H, Luis AS, Carvalho AL, Gilbert HJ, Boraston A, Fontes CMGA, Chai W, Ten F.  2012.  Designer-oligosaccharide microarrays to decipher ligands in mammalian and prokaryotic glucan-recognition systems. Glycobiology. 22:1612-1613., Number 11 AbstractWebsite
n/a
C
Frazao, C, Dias JM, Matias PM, Romao MJ, Carrondo MA, Hervas M, Navarro JA, Delarosa M, Sheldrick GM.  1995.  CYTOCHROME-C(6) FROM THE GREEN-ALGA MONORAPHIDIUM-BRAUNII - CRYSTALLIZATION AND PRELIMINARY DIFFRACTION STUDIES. Acta Crystallographica Section D-Biological Crystallography. 51:232-234. AbstractWebsite
n/a
Cunha, CA, Macieira S, Dias JM, Almeida G, Goncalves LL, Costa C, Lampreia J, Huber R, Moura JJG, Moura I, Romao MJ.  2003.  Cytochrome c nitrite reductase from Desulfovibrio desulfuricans ATCC 27774 - The relevance of the two calcium sites in the structure of the catalytic subunit (NrfA). Journal of Biological Chemistry. 278:17455-17465., Number 19 AbstractWebsite
n/a
Teixeira, S, Dias JM, Carvalho AL, Bourenkov G, Bartunik H, Almendra MJ, Moura I, Moura JJG, Romao MJ.  1999.  Crystallographic studies on a tungsten-containning formate dehydrogenase from Desulfovibrio gigas. Journal of Inorganic Biochemistry. 74:89-89., Number 1-4 AbstractWebsite
n/a
Dias, JM, Than ME, Huber R, Bourenkov GP, Bartunik HD, Bursakov S, Moura JJG, Moura I, Romao MJ.  1999.  Crystallographic studies of a dissimilatory nitrate reductase and mechanistic implications. Journal of Inorganic Biochemistry. 74:113-113., Number 1-4 AbstractWebsite
n/a
Zajc, A, Romao MJ, Turk B, Huber R.  1996.  Crystallographic and fluorescence studies of ligand binding to N-carbamoylsarcosine amidohydrolase from Arthrobacter sp. Journal of Molecular Biology. 263:269-283., Number 2 AbstractWebsite
n/a
Dias, JM, Carvalho AL, Kolln I, Calvete JJ, TopferPetersen E, Varela PF, Romero A, Urbanke C, Romao MJ.  1997.  Crystallization and preliminary x-ray diffraction studies of aSFP, a bovine seminal plasma protein with a single CUB domain architecture. Protein Science. 6:725-727., Number 3 AbstractWebsite
n/a
Dias, JM, Bonifacio C, Alves T, Moura JJG, Moura I, Romao MJ.  2002.  Crystallization and preliminary X-ray diffraction analysis of two pH-dependent forms of a di-haem cytochrome c peroxidase from Pseudomonas nautica. Acta Crystallographica Section D-Biological Crystallography. 58:697-699. AbstractWebsite
n/a
Bonifacio, C, Cunha CA, Muller A, Timoteo CG, Dias JM, Moura I, Romao MJ.  2003.  Crystallization and preliminary X-ray diffraction analysis of the di-haem cytochrome c peroxidase from Pseudomonas stutzeri. Acta Crystallographica Section D-Biological Crystallography. 59:345-347. AbstractWebsite
n/a
Santos-Silva, T, Diasa JM, Bourenkov G, Bartunik H, Moura I, Romao MJ.  2004.  Crystallization and preliminary X-ray diffraction analysis of the 16-haem cytochrome of Desulfovibrio gigas. Acta Crystallographica Section D-Biological Crystallography. 60:968-970. AbstractWebsite
n/a
Dias, JM, Bursakov S, Carneiro C, Moura JJG, Moura I, Romao MJ.  1999.  Crystallization and preliminary X-ray analysis of a nitrate reductase from Desulfovibrio desulfuricans ATCC 27774. Acta Crystallographica Section D-Biological Crystallography. 55:877-879. AbstractWebsite
n/a
Dias, JM, Cunha CA, Teixeira S, Almeida G, Costa C, Lampreia J, Moura JJG, Moura I, Romao MJ.  2000.  Crystallization and preliminary X-ray analysis of a membrane-bound nitrite reductase from Desulfovibrio desulfuricans ATCC 27774. Acta Crystallographica Section D-Biological Crystallography. 56:215-217. AbstractWebsite
n/a
Najmudin, S, Bonifacio C, Duarte AG, Pauleta SR, Moura I, Moura JJG, Romao MJ.  2009.  Crystallization and crystallographic analysis of the apo form of the orange protein (ORP) from Desulfovibrio gigas. (vol F65, pg 730, 2009). Acta Crystallographica Section F-Structural Biology and Crystallization Communications. 65:856-856. AbstractWebsite
n/a
Najmudin, S, Bonifacio C, Duarte AG, Pualeta SR, Moura I, Moura JJG, Romao MJ.  2009.  Crystallization and crystallographic analysis of the apo form of the orange protein (ORP) from Desulfovibrio gigas. Acta Crystallographica Section F-Structural Biology and Crystallization Communications. 65:730-732. AbstractWebsite
n/a
Romao, MJ, Archer M, Moura I, Moura JJG, Legall J, Engh R, Schneider M, Hof P, Huber R.  1995.  CRYSTAL-STRUCTURE OF THE XANTHINE OXIDASE-RELATED ALDEHYDE OXIDOREDUCTASE FROM D-GIGAS. Science. 270:1170-1176., Number 5239 AbstractWebsite
n/a
Archer, M, Huber R, Tavares P, Moura I, Moura JJG, Carrondo MA, Sieker LC, Legall J, Romao MJ.  1995.  CRYSTAL-STRUCTURE OF DESULFOREDOXIN FROM DESULFOVIBRIO-GIGAS DETERMINED AT 1.8 ANGSTROM RESOLUTION - A NOVEL NONHEME IRON PROTEIN-STRUCTURE. Journal of Molecular Biology. 251:690-702., Number 5 AbstractWebsite
n/a
Romao, MJ, Turk D, GomisRuth FX, Huber R, Schumacher G, Mollering H, Russmann L.  1992.  CRYSTAL-STRUCTURE ANALYSIS, REFINEMENT AND ENZYMATIC-REACTION MECHANISM OF N-CARBAMOYLSARCOSINE AMIDOHYDROLASE FROM ARTHROBACTER SP AT 2.0-ANGSTROM RESOLUTION. Journal of Molecular Biology. 226:1111-1130., Number 4 AbstractWebsite
n/a
Romero, A, Romao MJ, Varela PF, Kolln I, Dias JM, Carvalho AL, Sanz L, TopferPetersen E, Calvete JJ.  1997.  The crystal structures of two spermadhesins reveal the CUB domain fold. Nature Structural Biology. 4:783-788., Number 10 AbstractWebsite
n/a
Mukhopadhyay, A, Kladova AV, Bursakov SA, Gavel YO, Calvete JJ, Shnyrov VL, Moura I, Moura JJG, Romao MJ, Trincao J.  2011.  Crystal structure of the zinc-, cobalt-, and iron-containing adenylate kinase from Desulfovibrio gigas: a novel metal-containing adenylate kinase from Gram-negative bacteria. Journal of Biological Inorganic Chemistry. 16:51-61., Number 1 AbstractWebsite
n/a
Gomes, AS, Trovão F, Andrade Pinheiro B, Freire F, Gomes S, Oliveira C, Domingues L, Romão MJ, Saraiva L, Carvalho AL.  2018.  The Crystal Structure of the R280K Mutant of Human p53 Explains the Loss of DNA Binding. International Journal of Molecular Sciences. 19, Number 4}, ARTICLE NUMBER = {1184 AbstractWebsite

The p53 tumor suppressor is widely found to be mutated in human cancer. This protein is regarded as a molecular hub regulating different cell responses, namely cell death. Compelling data have demonstrated that the impairment of p53 activity correlates with tumor development and maintenance. For these reasons, the reactivation of p53 function is regarded as a promising strategy to halt cancer. In the present work, the recombinant mutant p53R280K DNA binding domain (DBD) was produced for the first time, and its crystal structure was determined in the absence of DNA to a resolution of 2.0 Å. The solved structure contains four molecules in the asymmetric unit, four zinc(II) ions, and 336 water molecules. The structure was compared with the wild-type p53 DBD structure, isolated and in complex with DNA. These comparisons contributed to a deeper understanding of the mutant p53R280K structure, as well as the loss of DNA binding related to halted transcriptional activity. The structural information derived may also contribute to the rational design of mutant p53 reactivating molecules with potential application in cancer treatment.

Dias, JM, Than ME, Humm A, Huber R, Bourenkov GP, Bartunik HD, Bursakov S, Calvete J, Caldeira J, Carneiro C, Moura JJG, Moura I, Romao MJ.  1999.  Crystal structure of the first dissimilatory nitrate reductase at 1.9 angstrom solved by MAD methods. Structure with Folding & Design. 7:65-79., Number 1 AbstractWebsite
n/a
Santos-Silva, T, Dias JM, Dolla A, Durand M-C, Goncalves LL, Lampreia J, Moura I, Romao MJ.  2007.  Crystal structure of the 16 heme cytochrome from Desulfovibrio gigas: A glycosylated protein in a sulphate-reducing bacterium. Journal of Molecular Biology. 370:659-673., Number 4 AbstractWebsite
n/a