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2005
Sampaio, J, Moniz A.  2005.  {Mapeamento De Indicadores de Qualificação e de Competência Profissional Num Sistema Complexo De Trabalho. O Caso Dos Serviços De Controlo De Tráfego Aéreo[Mapping of Qualification and Professional}, Nov. , Number 6415: University Library of Munich, Germany Abstract

Flexibilisation and complexification of working places, due to the information technologies, requires an holistic approach to the labour reality, in an integrative and wide perspective of different scenarios and operational contexts. Such new changes implies the development of new personal and professional features that are beyond the restrict frame of the autonomous, discrete and specialised work. The knowledge needed for the work in organisations can be searched in the working processes modelling. And that can be a constructive basis of a “knowledge map”. Thus, are described the activities of different working processes, and that induces the emergence of a group of informations (indicators) necessary to the construction of each competence that supports the execution of those processes. This action even allows the existence of possible gaps in the strategies of long-life education and training. They assume more and more a critical support to the need of updating and maintenance of professional competences. How to identify and operationalise the professional competences in a working complex system is one of the main issues in this paper. The case study presented in this paper is refered to the air traffic control and it presents the methodology used for the identification and validation of a group of structuring professional competencies that are evident in a complex working system.

Pinho, D, Besson S, Silva PJ, de Castro B, Moura I.  2005.  Isolation and spectroscopic characterization of the membrane-bound nitrate reductase from Pseudomonas chlororaphis DSM 50135, May 25. Biochimica Et Biophysica Acta-General Subjects. 1723:151-162., Number 1-3 AbstractWebsite

A nitrate reductase was solubilized with Triton X-100 from the membranes of Pseudomonas chlororaphis DSM 50135 grown microaerobically in the presence of nitrate. Like other membrane-bound nitrate reductases, it contains three subunits, of 129, 66 (64) and 24 kDa, referred to in the literature as alpha, beta and gamma, respectively. Electrocatalytic studies revealed that only the membrane-bound, not the solubilized form of the enzyme, can accept electrons from a menaquinone analog, menadione, whereas both forms can accept electrons from methylviologen. The isolated enzyme possesses several iron-sulfur clusters and a molybdopterin guanine dinucleotide active center. The iron-sulfur clusters can be grouped in two classes according to their redox properties, the high-potential and low-potential clusters. In the as-isolated enzyme, two forms of the molybdenum center, high- and low-pH, are detectable by electron paramagnetic resonance spectroscopy. The low-pH form shows a hyperfine splitting due to a proton, suggesting the presence of an -OHx ligand. Dithionite reduces the Mo(V) center to Mo(W) and subsequent reoxidization with nitrate originates a new Mo(V) signal, identical to the oxidized low-pH form but lacking its characteristic hyperfine splitting. The isolated preparation also contains heme c (in a sub-stoichiometric amount) with the ability to relay electrons to the molybdenum center, suggesting that this nitrate reductase may contain heme c instead of the heme b usually found in this class of enzymes. (c) 2005 Elsevier B.V. All rights reserved.

Machado, T, Moniz A.  2005.  Models and Practices in the Motor Vehicle Industry – contrasting cases from the Portuguese experience, Jun. , Number 6171: University Library of Munich, Germany Abstract

This paper presents and discusses two case studies in the Portuguese motor vehicle industry – Salvador Caetano’s Ovar Industrial Division (SCOID), a ‘Brownfield site’ with minority Toyota ownership; and Autoeuropa, a ‘Greenfield site’ wholly owned by Volkswagen. Basically, it considers the scope for the meaningful application of ‘Japanese’ organisational methods in these contexts, focusing on the human factor – i.e. as close as possible to the actors on the shop floor. After providing some insights into the Portuguese automotive industry, it profiles both SCOID and Autoeuropa and assesses each of their methods of work, within this balance of commitment between global and local. The main findings reveal the lag that can exist between theoretical models (namely those following a geographical criteria) and the actual practice carried out by manufacturers when tested outside their point of geographical origin.

Krings, B.  2005.  {Hen or Egg? The relationship between IC-technologies and social exclusion}, Jun , Number 9568: University Library of Munich, Germany Abstract

If we take a look at developments on the labour market, we find that the rate of employment stands in a close relationship to the introduction of new technologies and their social and cultural consequences. The immediate effects of new technologies on new forms of work-structures are, in fact, difficult to determine empirically. In order to avoid a strong technological bias in the scientific perspective, it seems important to consider carefully the normative objectives and goals, which are connected with the introduction of IC-technologies. But nevertheless it is difficult to define clearly the causes and the effects of new technologies as well as the technical changes and its social consequences. The intention of the article is to present the concept of social exclusion within the SOWING-project. Of course this concept is embedded in the scientific debate of the Information Society, which has a strong technological focus and represents the discussion of the Western, highly industrialized societies. But nevertheless the empirical findings of the SOWING project come to the general conclusion, that the rise of new forms of social exclusion cannot be considered as the result of the introduction of ICT, but as the result of the normative idea of a more effective and global organized economy. The social consequences of this development depend strongly on the establishment of a democratic procedure, which integrates the concerning social groups.

Machado, T, Moniz A.  2005.  {Models and Practices in the Motor Vehicle Industry – contrasting cases from the Portuguese experience}, Jun. , Number 6171: University Library of Munich, Germany Abstract

This paper presents and discusses two case studies in the Portuguese motor vehicle industry – Salvador Caetano’s Ovar Industrial Division (SCOID), a ‘Brownfield site’ with minority Toyota ownership; and Autoeuropa, a ‘Greenfield site’ wholly owned by Volkswagen. Basically, it considers the scope for the meaningful application of ‘Japanese’ organisational methods in these contexts, focusing on the human factor – i.e. as close as possible to the actors on the shop floor. After providing some insights into the Portuguese automotive industry, it profiles both SCOID and Autoeuropa and assesses each of their methods of work, within this balance of commitment between global and local. The main findings reveal the lag that can exist between theoretical models (namely those following a geographical criteria) and the actual practice carried out by manufacturers when tested outside their point of geographical origin.

Pinto, IV, Alves LB, Ortigueira M, Batista A.  2005.  ECG Wave Detector and Delineation with Wavelets, July. International Conference on Computational Intelligence in Medicine and Healthcare, CIMED 2005. Abstract
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Pinto, IV, Alves LB, Ortigueira M, Batista A.  2005.  ECG Wave Detector and Delineation with Wavelets, July. International Conference on Computational Intelligence in Medicine and Healthcare, CIMED 2005. Abstract

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Rato, R, Ortigueira M.  2005.  A Modified EMD Algorithm for Application in Biomedical Signal Processing, July. International Conference on Computational Intelligence in Medicine and Healthcare, CIMED 2005. Abstract
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Rato, R, Ortigueira M.  2005.  A Modified EMD Algorithm for Application in Biomedical Signal Processing, July. International Conference on Computational Intelligence in Medicine and Healthcare, CIMED 2005. Abstract

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Ortigueira, M, Tenreiro-Machado JA, da Costa JSá.  2005.  Which Differintegration?, July IEE Proceedings Vision, Image & Signal Processing. 152:846–850., Number 6: IET AbstractWebsite
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Tan, C, de Noronha RG, Roecker AJ, Pyrzynska B, Khwaja F, Zhang ZB, Zhang HC, Teng Q, Nicholson AC, Giannakakou P, Zhou W, Olson JJ, Pereira MM, Nicolaou KN, Van Meir EG.  2005.  Identification of a novel small-molecule inhibitor of the hypoxia-inducible factor 1 pathway, JAN 15. CANCER RESEARCH. 65:605-612., Number 2 Abstract
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Baptista, {PMRV}, c}alo Dória G{\c, Henriques D, Pereira E, Franco R.  2005.  Colorimetric detection of eukaryotic gene expression with DNA-derivatized gold nanoparticles, jan. Journal of Biotechnology. 119:111–7., Number 2: Elsevier Abstract

Thiol-linked DNA-gold nanoparticles were used in a novel colorimetric method to detect the presence of specific mRNA from a total RNA extract of yeast cells. The method allowed detection of expression of the FSY1 gene that encodes a specific fructose/H+ symporter in Saccharomyces bayanus PYCC 4565. FSY1 is strongly expressed when the yeast is grown in fructose as the sole carbon source, while cells cultivated in glucose as the sole carbon source repress gene expression. The presence of FSY1 mRNA is detected based on color change of a sample containing total RNA extracted from the organism and gold nanoparticles derivatized with a 15-mer of complementary single stranded DNA upon addition of NaCl. If FSY1 mRNA is present, the solution remains pink, changing to blue-purple in the absence of FSY1 mRNA. Direct detection of specific expression was possible from only 0.3 microg of unamplified total RNA without any further enhancement. This novel method is inexpensive, very easy to perform as no amplification or signal enhancement steps are necessary and takes less than 15 min to develop after total RNA extraction. No temperature control is necessary and color change can be easily detected visually.

Melo, M, Gaspar E, Madeira S, de Moura P, Alexandrino B, de Moura JJ.  2005.  The methylenetetrahydrofolate reductase (MTHFR) 677C-->T mutation and cardiovascular risk--A case of ischemic stroke and acute myocardial infarction, Jan. Rev Port Cardiol. 24:89-99., Number 1 AbstractWebsite

The authors report the case of a 39-year-old male patient who had an ischemic stroke (complete infarction of right anterior cerebral circulation) and an acute myocardial infarction during the same year. Molecular study revealed he was homozygous for the 677C-->T mutation in the gene coding for methylenetetrahydrofolate reductase, a key enzyme of folate metabolism; deficiency of this enzyme is associated with increased cardiovascular risk and neurological lesions. Some considerations are put forward about hyperhomocysteinemia and the MTHFR 677C-->T mutation as cardiovascular risk factors.

Baptista, {PMRV}.  2005.  Principles in genetic risk assessment., jan. Ther Clin Risk Manag. 1:15–20., Number 1 Abstract
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Abreu, AR, Costa I, Rosa C, Ferreira LM, Lourenco A, Santos PP.  2005.  New enantioselective method for hydration of alkenes using cyclodextrins as phase transfer catalyst, DEC 12. TETRAHEDRON. 61:11986-11990., Number 50 Abstract
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Aureliano, M, Tiago T, Gandara RM, Sousa A, Moderno A, Kaliva M, Salifoglou A, Duarte RO, Moura JJ.  2005.  Interactions of vanadium(V)-citrate complexes with the sarcoplasmic reticulum calcium pump, Dec. J Inorg Biochem. 99:2355-61., Number 12 AbstractWebsite

Among the biotargets interacting with vanadium is the calcium pump from the sarcoplasmic reticulum (SR). To this end, initial research efforts were launched with two vanadium(V)-citrate complexes, namely (NH(4))(6)[V(2)O(4)(C(6)H(4)O(7))(2)].6H(2)O and (NH(4))(6)[V(2)O(2)(O(2))(2)(C(6)H(4)O(7))(2)].4H(2)O, potentially capable of interacting with the SR calcium pump by combining kinetic studies with (51)V NMR spectroscopy. Upon dissolution in the reaction medium (concentration range: 4-0.5mM), both vanadium(V):citrate (VC) and peroxovanadium(V):citrate (PVC) complexes are partially converted into vanadate oligomers. A 1mM solution of the PVC complex, containing 184microM of the PVC complex, 94microM oxoperoxovanadium(V) (PV) species, 222microM monomeric (V1), 43microM dimeric (V2) and 53microM tetrameric (V4) species, inhibits Ca(2+) accumulation by 75 %, whereas a solution of the VC complex of the same vanadium concentration, containing 98microM of the VC complex, 263microM monomeric (V1), 64microM dimeric (V2) and 92microM tetrameric (V4) species inhibits the calcium pump activity by 33 %. In contrast, a 1 mM metavanadate solution, containing 460microM monomeric (V1), 90.2microM dimeric (V2) and 80microM tetrameric (V4) species, has no effect on Ca(2+) accumulation. The NMR signals from the VC complex (-548.0ppm), PVC complex (-551.5ppm) and PV (-611.1ppm) are broadened upon SR vesicle addition (2.5mg/ml total protein). The relative order for the half width line broadening of the NMR signals, which reflect the interaction with the protein, was found to be V4>PVC>VC>PV>V2=V1=1, with no effect observed for the V1 and V2 signals. Putting it all together the effects of two vanadium(V)-citrate complexes on the modulation of calcium accumulation and ATP hydrolysis by the SR calcium pump reflected the observed variable reactivity into the nature of key species forming upon dissolution of the title complexes in the reaction media.

Ortigueira, M.  2005.  Fractional Differences Integral Representation and its use to define Fractional Differintegrations, August. the ENOC-2005, Fifth EUROMECH Nonlinear Dynamics Conference. Abstract
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Ortigueira, M.  2005.  Fractional Differences Integral Representation and its use to define Fractional Differintegrations, August. the ENOC-2005, Fifth EUROMECH Nonlinear Dynamics Conference. Abstract

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Ortigueira, M.  2005.  A new look at the differintegration definition, August. ENOC-2005, Fifth EUROMECH Nonlinear Dynamics Conference. Abstract
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Ortigueira, M.  2005.  A new look at the differintegration definition, August. ENOC-2005, Fifth EUROMECH Nonlinear Dynamics Conference. Abstract

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More, C, Asso M, Roger G, Guigliarelli B, Caldeira J, Moura J, Bertrand P.  2005.  Study of the spin-spin interactions between the metal centers of Desulfovibrio gigas aldehyde oxidoreductase: identification of the reducible sites of the [2Fe-2S]1+,2+ clusters, Aug 30. Biochemistry. 44:11628-35., Number 34 AbstractWebsite

The aldehyde oxidoreductase from Desulfovibrio gigas belongs to the family of molybdenum hydroxylases. Besides a molybdenum cofactor which constitutes their active site, these enzymes contain two [2Fe-2S](2+,1+) clusters which are believed to transfer the electrons provided by the substrate to an acceptor which is either a FAD group or an electron-transferring protein. When the three metal centers of D. gigas AOR are simultaneously paramagnetic, splittings due to intercenter spin-spin interactions are visible when the EPR spectra are recorded at low temperatures. By studying quantitatively these interactions with a model based on the X-ray crystal structure, which takes into consideration the interactions between the magnetic moments carried by all the metal sites of the system, it is possible to determine the location of the reducible sites of the [2Fe-2S] clusters. When combined with the electron-transfer pathways proposed on the basis of the X-ray crystal structure, the results provide a detailed description of the electron-transfer system of D. gigas AOR.

Palma, PN, Lagoutte B, Krippahl L, Moura JJ, Guerlesquin F.  2005.  Synechocystis ferredoxin/ferredoxin-NADP(+)-reductase/NADP+ complex: Structural model obtained by NMR-restrained docking, Aug 29. FEBS Lett. 579:4585-90., Number 21 AbstractWebsite

Ferredoxin (Fd) and ferredoxin-NADP(+)-reductase (FNR) are two terminal physiological partners of the photosynthetic electron transport chain. Based on a nuclear magnetic resonance (NMR)-restrained-docking approach, two alternative structural models of the Fd-FNR complex in the presence of NADP+ are proposed. The protein docking simulations were performed with the software BiGGER. NMR titration revealed a 1:1 stoichiometry for the complex and allowed the mapping of the interacting residues at the surface of Fd. The NMR chemical shifts were encoded into distance constraints and used with theoretically calculated electronic coupling between the redox cofactors to propose experimentally validated docked complexes.

Simões, S, Seixas J, Huppes G.  2005.   tangled web: assessing overlaps between energy and environmental policy instruments in place along electricity systems, 30 May - 3 June. ECEEE - European Council for an Energy Efficient Economy 2005 Summer Study. , Mandelieu, France
Pina, J, de Melo JS, Pina F, Lodeiro C, Lima JC, Parola AJ, Soriano C, Clares MP, Albelda MT, Aucejo R, Garcia-Espana E.  2005.  Spectroscopy and coordination chemistry bisnaphthalene-bisphenanthroline ligand of a new displaying a sensing ability for metal cations, 2005. Inorganic Chemistry. 44:7449-7458. AbstractWebsite

A new fluorescent macrocyclic structure (0) bearing two naphthalene units at both ends of a cyclic polyaminic chain containing two phenanthroline units was investigated with potentiometric and fluorescence (steady-state and time-resolved) techniques. The fluorescence emission spectra show the simultaneous presence of three bands: a short wavelength emission band (naphthalene monomer), a middle emission band (phenanthroline emission), and a long-wavelength band. All three bands were found to be dependent on the protonation state of the macrocyclic unit (including the polyaminic and phenanthroline structures). The existence of the long-wavelength emission band is discussed and is shown to imply that a bending movement involving the two phenanthroline units leads to excimer formation. This is determined by comparison with the excimer emission formed by intermolecular association of 1,10-phenanthroline. With ligand L1, excimer formation occurs only at pH values above 4. At very acidic pH values, the protonation of the polyamine bridges is extensive leading to a rigidity of the system that precludes the bending movement. The interaction with metal cations Zn(II) and Cu(II) was also investigated. Excimer formation is, in these situations, increased with Zn(II) and decreased with Cu(II). The long-emission band is shown to present a different wavelength maximum, depending on the metal, which can be considered as a characteristic to validate the use of ligand L1 as a sensor for a given metal.

Galindo, F, Lima JC, Luis SV, Melo MJ, Parola AJ, Pina F.  2005.  Water/humidity and ammonia sensor, based on a polymer hydrogel matrix containing a fluorescent flavylium compound, 2005. Journal of Materials Chemistry. 15:2840-2847. AbstractWebsite

Flavylium compounds can conveniently be encapsulated in water permeable cross-linked poly(2-hydroxyethyl methacrylate) ( PHEMA) polymer hydrogel matrices. The polymer is also permeable to gases, for example ammonia and hydrogen chloride. The ability of the polymer to concentrate water from the surrounding atmosphere was demonstrated. The absorption and emission spectra of the encapsulated flavylium compounds are very dependent on the pH, and by consequence ammonia ( or hydrogen chloride) can be easily detected. The intensity of the fluorescence emission of the flavylium cation (AH+ species obtained in acidic media) is very dependent on the water content due to the efficient excited state proton transfer involving the AH(+)* excited state and water. The combination of flavylium emission sensitivity to water and ability of the polymer to concentrate water from the surrounding atmosphere, confers this material potential utility as a humidity sensor with high sensitivity.