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2021
Inocencio, S, Cordeiro T, Matos I, Danede F, Sotomayor JC, Fonseca IM, Correia NT, Corvo MC, Dionisio M.  2021.  Ibuprofen incorporated into unmodified and modified mesoporous silica: From matrix synthesis to drug release, {JAN}. MICROPOROUS AND MESOPOROUS MATERIALS. 310:110541. AbstractWebsite

{Aiming to rationalize the release profile of an incorporated pharmaceutical drug in terms of its mobility, driven by guest-host interactions, the poorly water-soluble ibuprofen drug was loaded in a mesoporous inorganic silica matrix with unmodified (MCM-41) and modified surface (MCM-41sil) by post-synthesis silylation, both having pore sizes similar to 3 nm. The single calorimetric detection of a broad glass transition step for both ibuprofen com-posites indicates full drug amorphization, confirmed by the only appearance of an amorphous halo in the powder XRD patterns. Moreover, a gradient profile is disclosed by the heat flux derivative plot in the glass transition, in coherence with the thermogravimetric profile that shows a multi-step decomposition trace for confined ibuprofen in these matrixes. While identical guest dynamics, as probed by dielectric relaxation spectroscopy, were found in both dehydrated composites, a significant molecular population with faster relaxation exists in the hydrated state for the drug inside the unmodified matrix. This was rationalized as the concurrence of true confinement effects, which manifest under nanometer dimensions, and greater water affinity of the unmodified matrix, forcing the drug molecules to be placed mostly in the pore core. Finite size effects are also felt in both dehydrated composites, however guest-host interactions give origin to a dominant population with slowed down mobility that governs the overall guest dynamics. In spite of an inferior number of active sites for drug adsorption in the silylated matrix, a faster ibuprofen delivery in phosphate buffer (pH = 6.8) was observed when the drug is released from unmodified MCM-41 in the hydrated state. Therefore, our results suggest that a relevant role is played by water molecules, which impair a strong guest adsorption in the host surface more efficiently than the limited surface modification, influence the higher ratio of a faster population in the pore core and facilitate the diffusion of the aqueous releasing media inside pores.}

Cordeiro, R, Beira MJ, Cruz C, Figueirinhas JL, Corvo MC, Almeida PL, Rosatella AA, Afonso CAM, Daniel CI, Sebastiao PJ.  2021.  Tuning the H-1 NMR Paramagnetic Relaxation Enhancement and Local Order of {[}Aliquat](+)-Based Systems Mixed with DMSO, {JAN}. International Journal of Molecular Sciences. 22:706., Number {2} AbstractWebsite

{Understanding the behavior of a chemical compound at a molecular level is fundamental, not only to explain its macroscopic properties, but also to enable the control and optimization of these properties. The present work aims to characterize a set of systems based on the ionic liquids {[}Aliquat]{[}Cl] and {[}Aliquat]{[}FeCl4] and on mixtures of these with different concentrations of DMSO by means of H-1 NMR relaxometry, diffusometry and X-ray diffractometry. Without DMSO, the compounds reveal locally ordered domains, which are large enough to induce order fluctuation as a significant relaxation pathway, and present paramagnetic relaxation enhancement for the {[}Aliquat]{[}Cl] and {[}Aliquat]{[}FeCl4] mixture. The addition of DMSO provides a way of tuning both the local order of these systems and the relaxation enhancement produced by the tetrachloroferrate anion. Very small DMSO volume concentrations (at least up to 1%) lead to enhanced paramagnetic relaxation without compromising the locally ordered domains. Larger DMSO concentrations gradually destroy these domains and reduce the effect of paramagnetic relaxation, while solvating the ions present in the mixtures. The paramagnetic relaxation was explained as a correlated combination of inner and outer-sphere mechanisms, in line with the size and structure differences between cation and anion. This study presents a robust method of characterizing paramagnetic ionic systems and obtaining a consistent analysis for a large set of samples having different co-solvent concentrations.}

2020
Silva, W, Zanatta M, Ferreira AS, Corvo MC, Cabrita EJ.  2020.  Revisiting Ionic Liquid Structure-Property Relationship: A Critical Analysis, {OCT}. International Journal of Molecular Sciences. 20:7745., Number {20} AbstractWebsite

{In the last few years, ionic liquids (ILs) have been the focus of extensive studies concerning the relationship between structure and properties and how this impacts their application. Despite a large number of studies, several topics remain controversial or not fully answered, such as: the existence of ion pairs, the concept of free volume and the effect of water and its implications in the modulation of ILs physicochemical properties. In this paper, we present a critical review of state-of-the-art literature regarding structure-property relationship of ILs, we re-examine analytical theories on the structure-property correlations and present new perspectives based on the existing data. The interrelation between transport properties (viscosity, diffusion, conductivity) of IL structure and free volume are analysed and discussed at a molecular level. In addition, we demonstrate how the analysis of microscopic features (particularly using NMR-derived data) can be used to explain and predict macroscopic properties, reaching new perspectives on the properties and application of ILs.}

Barrulas, V, R, Nunes AD, Sequeira SO, Casimiro MH, Corvo MC.  2020.  Cleaning fungal stains on paper with hydrogels: The effect of pH control, {AUG}. International Biodeterioration & Biodegradation. 152:104996. AbstractWebsite

{Fungal stains affect documents and artworks on paper all over the world, diminishing their chemical stability and compromising their readability. The present paper studies the suitability of agarose and gellan gum hydrogels to remove fungal stains from paper, using paper impregnated with alizarin as a model system to simulate the most common colorant molecules produced by fungi - polyketide quinones. The effect of pH variation on the efficacy of the gels was evaluated by UV spectrometry. The results show that the cleaning efficacy of the gels greatly depends on the gel matrix, the colorant molecules, and the pH balance of the process.}

Adeoye, O, Conceição J, Serra PA, da Silva AB, Duarte N, Guedes RC, Corvo MC, Aguiar-Ricardo A, Jicsinszky L, Casimiro T, Cabral-Marques H.  2020.  Cyclodextrin solubilization and complexation of antiretroviral drug lopinavir: In silico prediction; Effects of derivatization, molar ratio and preparation method. Carbohydrate Polymers. 227:115287.: Elsevier AbstractWebsite

Lopinavir (LPV) is currently used in combination with ritonavir for the clinical management of HIV infections due to its limited oral bioavailability. Herein, we report the application of an in silico method to study cyclodextrin (CyD) host-guest molecular interaction with LPV for the rational selection of the best CyD for developing a CyD based LPV delivery system. The predicted CyD, a (2-hydroxy)propyl-gamma derivative with high degree of substitution (HP17-γ-CyD) was synthesized and comparatively evaluated with γ-CyD and the commercially available HP-γ-CyD. All complexes were prepared by supercritical assisted spray drying (SASD) and co-evaporation (CoEva) at molar ratios (1:1 and 1:2); and afterwards fully characterized. Results indicate a higher LPV amorphization and solubilization ability of HP17-γ-CyD. The SASD processing technology also enhanced LPV solubilization and release from complexes. The application of in silico methodologies is a feasible approach for the rational and/or deductive development of CyD drug delivery systems.

dos Santos, LM, Bernard FL, Polesso BB, Pinto IS, Frankenberg CC, Corvo MC, Almeida PL, Cabrita E, Menezes S, Einloft S.  2020.  Designing silica xerogels containing RTIL for CO2 capture and CO2/CH4 separation: Influence of ILs anion, cation and cation side alkyl chain length and ramification. Journal of Environmental Management. 268:110340. AbstractWebsite

CO2 separation from natural gas is considered to be a crucial strategy to mitigate global warming problems, meet product specification, pipeline specs and other application specific requirements. Silica xerogels (SX) are considered to be potential materials for CO2 capture due to their high specific surface area. Thus, a series of silica xerogels functionalized with imidazolium, phosphonium, ammonium and pyridinium-based room-temperature ionic liquids (RTILs) were synthesized. The synthesized silica xerogels were characterized by NMR, helium pycnometry, DTA-TG, BET, SEM and TEM. CO2 sorption, reusability and CO2/CH4 selectivity were assessed by the pressure-decay technique. Silica xerogels containing IL demonstrated advantages compared to RTILs used as separation solvents in CO2 capture processes including higher CO2 sorption capacity and faster sorption/desorption. Using fluorinated anion for functionalization of silica xerogels leads to a higher affinity for CO2 over CH4. The best performance was obtained by SX- [bmim] [TF2N] (223.4 mg CO2/g mg/g at 298.15 K and 20 bar). Moreover, SX- [bmim] [TF2N] showed higher CO2 sorption capacity as compared to other reported sorbents. CO2 sorption and CO2/CH4 selectivity results were submitted to an analysis of variance and the means compared using Tukey's test (5%).

Mouquinho, A, Corvo MC, Almeida PL, Feio GM, Sotomayor J.  2020.  Influence of chain length of prepolymers in permanent memory effect of PDLC assessed by solid-state NMR. Liquid Crystals. 47:522–530., Number 4: Taylor & Francis AbstractWebsite

The relationship between linear chain (ethylene oxide units) length of polymerisable monomers with morphology, electro-optical properties and 13C nuclear magnetic resonance (NMR) spectroscopy of the corresponding polymer-dispersed liquid crystal (PDLC) films was investigated. The preferred liquid crystal molecule alignment and permanent memory effect of PDLC were greatly influenced by the length of the molecular chain of prepolymers to be incorporated as a polymer matrix. By increasing the number of ethylene oxide in prepolymer chain and maintaining the number of functionalities (polymerisable groups in each monomer molecule), the permanent memory effect of PDLC increased, as proved by solid-state 13C NMR spectroscopy.

Zanatta, M, Simon NM, Dupont J.  2020.  The Nature of Carbon Dioxide in Bare Ionic Liquid. ChemSusChem. 13:3101-3109. AbstractWebsite

Ionic liquids (ILs) are among the most studied and promising materials for selective CO2 capture and transformation. The high CO2 sorption capacity associated with the possibility to activate this rather stable molecule through stabilization of ionic/radical species or covalent interactions either with the cation or anion has opened new avenues for CO2 functionalization. However, recent reports have demonstrated that another simpler and plausible pathway is also involved in the sorption/activation of CO2 by ILs associated with basic anions. Bare ILs or IL solutions contain almost invariable significant amounts of water and through interaction with CO2 generate carbonates/bicarbonates rather than carbamic acids or amidates. In these cases, the IL acts as a base and not a nucleophile and yields buffer‐like solutions that can be used to shift the equilibrium toward acid products in different CO2 reutilization reactions. In this Minireview, the emergence of IL buffer‐like solutions as a new reactivity paradigm in CO2 capture and activation is described and analyzed critically, mainly through the evaluation of NMR data.

2019
Almeida, APC, Querciagrossa L, Silva PES, Goncalves F, Canejo JP, Almeida PL, Godinho MH, Zannoni C.  2019.  Reversible water driven chirality inversion in cellulose-based helices isolated from Erodium awns, {APR 7}. Soft Matter. 15:2838-2847., Number {13} AbstractWebsite

Among the movements observed in some cellulosic structures produced by plants are those that involve the dispersion and burial of seeds, as for example in Erodium from the Geraniaceae plant family. Here we report on a simple and efficient strategy to isolate and tune cellulose-based hygroscopic responsive materials from Erodium awns' dead tissues. The stimuli-responsive material isolated forms left-handed (L) or right-handed (R) helical birefringent transparent ribbons in the wet state that reversibly change to R helices when the material dries. The humidity-driven motion of dead tissues is most likely due to a composite material made of cellulose networks of fibrils imprinted by the plant at the nanoscale, which reinforces a soft wall polysaccharide matrix. The inversion of the handedness is explained using computational simulations considering filaments that contract and expand asymmetrically. The awns of Erodium are known to present hygroscopic movements, forming R helices in the dry state, but the possibility of actuating chirality via humidity suggests that these cellulose-based skeletons, which do not require complicated lithography and intricate deposition techniques, provide a diverse range of applications from intelligent textiles to micro-machines.

Zanatta, M, Simon NM, dos Santos FP, Corvo MC, Cabrita EJ, Dupont J.  2019.  Correspondence on “Preorganization and Cooperation for Highly Efficient and Reversible Capture of Low-Concentration CO2 by Ionic Liquids”. Angewandte Chemie International Edition. AbstractWebsite

The preorganization and cooperation mechanism of imide‐based ionic liquids reported in a recent Communication was evocated to rationalize the extremely high gravimetric CO2 capture displayed by these fluids. An analysis of the reported spectroscopic evidences together with additional experiments led to the proposition of an alternative, simpler, and feasible mechanism involving the formation of bicarbonate.

Queda, F, Covas G, Silva T, Santos CA, Bronze MR, Cañada FJ, Corvo MC, Filipe SR, Marques MMB.  2019.  A top-down chemo-enzymatic approach towards N-acetylglucosamine-N-acetylmuramic oligosaccharides: Chitosan as a reliable template. Carbohydrate Polymers. 224:115133.: Elsevier AbstractWebsite

An unprecedented approach towards oligosaccharides containing N-acetylglucosamine-N-acetylmuramic (NAG-NAM) units was developed. These novel bacterial cell wall surrogates were obtained from chitosan via a top down approach involving both chemical and enzymatic reactions. The chemical modification of chitosan using a molecular clamp based strategy, allowed obtaining N-acetylglucosamine-N-acetylmuramic (NAG-NAM) containing oligomers. Intercalation of NAM residues was confirmed through the analysis of oligosaccharide fragments from enzymatic digestion and it was found that this route affords NAG-NAM containing oligosaccharides in 33% yield. These oligosaccharides mimic the carbohydrate basic skeleton of most bacterial cell surfaces. The oligosaccharides prepared are biologically relevant and will serve as a platform for further molecular recognition studies with different receptors and enzymes of both bacterial cell wall and innate immune system. This strategy combining both chemical modification and enzymatic digestion provides a novel and simple route for an easy access to bacterial cell wall fragments – biologically important targets.

2018
Mirante, F, Dias L, Silva M, Ribeiro SO, Corvo MC, de Castro B, Granadeiro CM, Balula SS.  2018.  Efficient heterogeneous polyoxometalate-hybrid catalysts for the oxidative desulfurization of fuels. Catalysis Communications. 104:1–8.: Elsevier AbstractWebsite

The heterogenization of the highly active monovacant polyoxotungstate ([PW11O39]7 −, abbreviated as PW11) was achieved by preparing the corresponding long chain quaternary ammonium salt (ODA7PW11, ODA = CH3(CH2)17(CH3)3N). The complete cation exchange confers total heterogeneity to the monovacant catalyst while keeping its oxidative catalytic activity. In fact, the heterogeneous catalyst allowed for the complete desulfurization of a multicomponent model diesel (2000 ppm S) after 40 min of reaction, conciliating extraction (using BMIMPF6 solvent) and oxidation (ECODS process using H2O2 oxidant). The heterogeneous catalyst has shown a superior desulfurization performance when compared with the homogeneous quaternary ammonium TBAPW11 catalyst (TBA = (C4H9)4 N). Both hybrid catalysts have been successfully reused in consecutive ECODS cycles. Additionally, the long carbon chain cations provide a protective environment around the polyoxometalate allowing for ODA7PW11 to retain its heterogeneity and structure after the ECODS process.

Beira, JM, Silva MP, Condesso M, Cosme P, Almeida PL, Corvo M, Sebastião PJ, Figueirinhas JL, de Pinho MN.  2018.  Molecular order and dynamics of water in hybrid cellulose acetate–silica asymmetric membranes. Molecular Physics. :1–8.: Taylor & Francis AbstractWebsite

In this work 2H NMR spectroscopy and 1H NMR relaxometry and diffusometry were used to characterise water order and dynamics in cellulose acetate/silica asymmetric membranes. Two hydrated membranes were characterised allowing the identification of extra ordering of the water molecules and the presence in each membrane of up to two spectral components with different degrees of order and different T1 values. The mechanism behind this order increase was ascribed to the rapid exchange of the water molecules between the pore walls and its interior. T1 relaxometry dispersions allowed for the identification of the relevant mechanisms of pore-confined water motion, with rotations mediated by translational displacements (RMTD) as the dominant mechanism in the low frequency region. Using the RMTD low cut off frequency along with the in situ directly measured diffusion constant it was possible do determine characteristic lengths of correlated water motion in both membranes studied, which fall in ranges compatible with typical pore dimensions in similar membranes.

Braz, L, Grenha A, Corvo MC, Lourenço JP, Ferreira D, Sarmento B, da Costa ARM.  2018.  Synthesis and characterization of Locust Bean Gum derivatives and their application in the production of nanoparticles. Carbohydrate Polymers. 181:974–985.: Elsevier AbstractWebsite

The development of LBG-based nanoparticles intending an application in oral immunization is presented. Nanoparticle production occurred by mild polyelectrolyte complexation, requiring the chemical modification of LBG. Three LBG derivatives were synthesized, namely a positively charged ammonium derivative (LBGA) and negatively charged sulfate (LBGS) and carboxylate (LBGC) derivatives. These were characterized by Fourier-transform infrared spectroscopy, elemental analysis, nuclear magnetic resonance spectroscopy, gel permeation chromatography, and x-ray diffraction. As a pharmaceutical application was aimed, a toxicological analysis of the derivatives was performed by both MTT test and LDH release assay.

Several nanoparticle formulations were produced using LBGA or chitosan (CS) as positively charged polymers, and LBGC or LBGS as negatively charged counterparts, producing nanoparticles with adequate properties regarding an application in oral immunization.

dos Santos, LM, Ligabue R, Dumas A, Le Roux C, Micoud P, Meunier J-F, Martin F, Corvo M, Almeida P, Einloft S.  2018.  Waterborne polyurethane/Fe3O4-synthetic talc composites: synthesis, characterization, and magnetic properties. Polymer Bulletin. :1–16.: Springer Berlin Heidelberg AbstractWebsite

Nano-Fe3O4-synthetic talc gel was used as filler in the synthesis of waterborne polyurethane/Fe3O4-synthetic talc nanocomposites. This filler presents numerous edges (Si–O and Mg–O) and OH groups easily forming hydrogen bonds and polar interaction with water conferring hydrophilic character, consequently improving filler dispersion within a water-based matrix. Yet, the use of waterborne polyurethane (WPU) as matrix must be highlighted due to its environmentally friendly characteristics and low toxicity compared to solvent-based product. Fe3O4-synthetic talc-nanofillers were well dispersed into the polyurethane matrix even at high filler content as supported by XRD and TEM analyses. NMR indicates the interaction of filler OH groups with the matrix. For all nanocomposites, one can see a typical ferromagnetic behavior below Curie temperature (about 120 K) and a superparamagnetic behavior above this temperature. The use of Fe3O4-synthetic talc for obtaining magnetic nanocomposites resulted in improved materials with superior mechanical properties compared to solvent-based nanocomposites.

2017
Beira, MJ, Daniel CI, Almeida PL, Corvo MC, Rosatella AA, Afonso CAM, Sebastiao PJ.  2017.  1H NMR Relaxometry and Diffusometry Study of Magnetic and Non-Magnetic Ionic Liquid-Based Solutions: Co-Solvent and Temperature Effects. The Journal of Physical Chemistry B. : ACS Publications AbstractWebsite

In this work, 1H NMR relaxometry and diffusometry as well as viscometry experiments were carried out as a means to study the molecular dynamics of magnetic and non-magnetic ionic liquid-based systems. In order to evaluate the effect of a co-solvent on the super-paramagnetic properties observed for Aliquat-iron-based magnetic ionic liquids, mixtures comprising different concentrations, 1% and 10% (v/v), of DMSO-d6 were prepared and analyzed. The results suggest that, when at low concentrations, DMSO-d6 promotes more structured ionic arrangements, thus enhancing these super-paramagnetic properties. Furthermore, the analysis of temperature and water concentration effects allowed to conclude that neither one of these variables sufficiently affected the super-paramagnetic properties of the studied magnetic ionic liquids.

Dupont, J, Simon NM, Zanatta M, dos Santos FP, Corvo MC, Cabrita EJ.  2017.  Carbon dioxide capture by aqueous ionic liquid solutions. ChemSusChem. AbstractWebsite

Confined water in aqueous solutions of imidazolium-based ionic liquids (ILs) associated with acetate and imidazolate anions react reversibly with CO2 to yield bicarbonate. Three types of CO2 sorption in these “IL aqueous solutions” were observed: physical, CO2-imidazolium adduct generation, and bicarbonate formation (up to 1.9 molbicarbonate mol−1 of IL), resulting in a 10:1 (molar ratio) total absorption of CO2 relative to imidazolate anions in the presence of water 1:1000 (IL/water). These sorption values are higher than the classical alkanol amines or even alkaline aqueous solutions under similar experimental conditions.

Berride, F, Troche-Pesqueira E, Feio G, Cabrita EJ, Sierra T, Navarro-Vázquez A, Cid MM.  2017.  Chiral amplification of disodium cromoglycate chromonics induced by a codeine derivative. Soft Matter. 13(38):6810-6815. AbstractWebsite

Chromonic liquid crystals (CLC) are lyotropic phases formed by discotic mesogens in water. Simple chiral dopants such as amino acids have been reported to turn chromonic liquid crystals into their cholesteric counterparts. Here we report a chirality amplification effect in the nematic phase of a 9 wt% disodium cromoglycate (DSCG) lyotropic liquid crystal (LLC) upon doping with a water-soluble codeine derivative. The transition on cooling the isotropic to the nematic phase showed the presence of homochiral spindle-shaped droplets (tactoids). NMR DOSY experiments on a triple gradient probe revealed a small degree of diffusion anisotropy for the alkaloid embedded in the liquid crystal structure. These results in combination with XRD, CD and POM experiments agree with a supramolecular aggregation model based on simple columnar stacks.

Ferreira, J, Santos T, Pereira P, Corvo MC, Queiroz JA, Sousa F, Cruz C.  2017.  Naphthalene amine support for G-quadruplex isolation. Analyst. 142(16):2982-2994.: Royal Society of Chemistry AbstractWebsite

G-quadruplex (G4) is involved in many biological processes, such as telomere function, gene expression and DNA replication. The selective isolation of G4 using affinity ligands that bind tightly and selectively is a valuable strategy for discovering new G4 binders for the separation of G4 from duplexes or the discrimination of G4 structures. In this work, one affinity chromatographic support was prepared using a naphthalene amine as a G4 binder. The ligand was immobilized on epoxy-activated Sepharose CL-6B using a long spacer arm and was characterized by HR-MAS spectroscopy. The supercoiled (sc) isoform of pVAX1-LacZ and pVAX1-G4 was isolated from a native sample. Also, the recovery and isolation of the plasmid isoforms from Escherichia coli lysate samples were achieved using an ionic gradient with different concentrations of NaCl in 10 mM Tris-HCl (pH 7.4). The retention times of different DNA/single strand sequences that can form G4, such as, c-MYC, c-kit1, c-kit2, tetrameric, telomeric (23AG), thrombin aptamer (TBA) and 58Sγ3 in this support were evaluated. Our experimental results suggest that the support exhibits selectivity for parallel c-MYC and c-kit1 G4s. In vitro transcription was performed using purified sc pVAX1-G4 and pPH600 to induce G4 formation and circular dichroism (CD) analysis confirmed that both transcripts adopt a parallel G4 topology.

dos Santos, LM, Ligabue R, Dumas A, Le Roux C, Micoud P, Meunier J-F, Martin F, Corvo M, Almeida P, Einloft S.  2017.  Waterborne polyurethane/Fe3O4-synthetic talc composites: synthesis, characterization, and magnetic properties. Polymer Bulletin. :1-16.: Springer Berlin Heidelberg AbstractWebsite

Nano-Fe3O4-synthetic talc gel was used as filler in the synthesis of waterborne polyurethane/Fe3O4-synthetic talc nanocomposites. This filler presents numerous edges (Si–O and Mg–O) and OH groups easily forming hydrogen bonds and polar interaction with water conferring hydrophilic character, consequently improving filler dispersion within a water-based matrix. Yet, the use of waterborne polyurethane (WPU) as matrix must be highlighted due to its environmentally friendly characteristics and low toxicity compared to solvent-based product. Fe3O4-synthetic talc-nanofillers were well dispersed into the polyurethane matrix even at high filler content as supported by XRD and TEM analyses. NMR indicates the interaction of filler OH groups with the matrix. For all nanocomposites, one can see a typical ferromagnetic behavior below Curie temperature (about 120 K) and a superparamagnetic behavior above this temperature. The use of Fe3O4-synthetic talc for obtaining magnetic nanocomposites resulted in improved materials with superior mechanical properties compared to solvent-based nanocomposites.

Dupont, J, Simon NM, Zanatta M, dos Santos FP, Corvo MC, Cabrita EJ.  2017.  Carbon dioxide capture by aqueous ionic liquid solutions. ChemSusChem. Abstract
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2016
Santos, T, Carvalho J, Corvo MC, Cabrita EJ, Queiroz JA, Cruz C.  2016.  L-tryptophan and dipeptide derivatives for supercoiled plasmid DNA purification. International Journal of Biological Macromolecules. 87:385-396.: Elsevier AbstractWebsite

The present study focus on the preparation of chromatography supports for affinity-based chromatography of supercoiled plasmid purification. Three l-tryptophan based supports are prepared through immobilization on epoxy-activated Sepharose and characterized by HR-MAS NMR. The SPR is employed for a fast screening of l-tryptophan derivatives, as potential ligands for the biorecognition of supercoiled isoform, as well as, to establish the suitable experimental conditions for the chromatography. The results reveal that the overall affinity is high (KD = 10−9 and 10−8 M) and the conditions tested show that the use of HEPES 100 mM enables the separation and purification of supercoiled at T = 10 °C. The STD-NMR is performed to accomplish the epitope mapping of the 5′-mononucleotides bound to l-tryptophan derivatives supports. The data shows that the interactions between the three supports and the 5′-mononucleotides are mainly hydrophobic and π–π stacking. The chromatography experiments are performed with l-tryptophan support and plasmids pVAX-LacZ and pPH600. The supercoiled isoform separation is achieved at T = 10 °C by decreasing the concentration of (NH4)2SO4 from 2.7 to 0 M in HEPES for pVAX-LacZ and 2.65 M to 0 M in HEPES for pPH600.

Overall, l-tryptophan derivatives can be a promising strategy to purify supercoiled for pharmaceutical applications.

Fundo, JF, Galvis-Sanchez A, Madureira AR, Carvalho A, Feio G, Silva CLM, Quintas MAC.  2016.  NMR water transverse relaxation time approach to understand storage stability of fresh-cut ‘Rocha’pear. LWT-Food Science and Technology. 74:280-285. AbstractWebsite

Fresh-cut fruit is an important segment in fruit market due to the increasing demand for healthy/convenient foods. However, processing promotes a decrease in fruits stability with faster physiological and microbiological deteriorations. Food stability is strongly attributed to its molecular dynamics and “water availability”. Understanding changes in water location/mobility is of utmost importance, since water dynamics profoundly influences physic-chemical and microbiological quality of foods. Nuclear magnetic resonance spectroscopy (NMR) is a methodology used to study the food constituents' molecular dynamics.

The aim of this study is to use NMR to evaluate changes in water mobility that occurred in fresh-cut pear tissues during storage, by measuring the transverse relaxation time (T2) parameter.

Results showed the existence of three water classes in the cells after processing, with T2 values of 10 ms, 187 ms and 3s for cellular wall, cytoplasm and vacuole, respectively. Also, the obtained results demonstrated that T2 was affected by processing and storage. Moreover, a relationship between T2, microstructure and the quality parameters was established. T2, maximum value increased with pear hardness as well as water activity. On the contrary, a decrease in total colour difference (TCD) was found with T2.

Results demonstrate the usefulness of the application of NMR relaxometry in food studies.

Santos, T, Carvalho J, Corvo MC, Cabrita EJ, Queiroz JA, Cruz C.  2016.  L-tryptophan and dipeptide derivatives for supercoiled plasmid DNA purification. International Journal of Biological Macromolecules. : Elsevier Abstract
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2015
Ferreira, S, Carvalho J, Valente JF, Corvo M, Cabrita EJ, Sousa F, Queiroz JA, Cruz C.  2015.  Affinity analysis and application of dipeptides derived from l-tyrosine in plasmid purification. J Chromatogr B Analyt Technol Biomed Life Sci. 1006:47-58. AbstractWebsite

The developments in the use of plasmid DNA (pDNA) in gene therapy and vaccines have motivated the search and improvement of optimized purification processes. In this context, dipeptides l-tyrosine-l-tyrosine and l-tyrosine-l-arginine are synthetized to explore their application as affinity ligands for supercoiled (sc) plasmid DNA (pDNA) purification. The synthesis is based on the protection of N-Boc-l-tyrosine, followed by condensation with l-tyrosine or l-arginine methyl esters in the presence of dicyclohexylcarbodiimide (DCC), which after hydrolysis and acidification give the afforded dipeptides. The supports are then obtained by coupling l-tyrosine, l-tyrosine-l-tyrosine and l-tyrosine-l-arginine to epoxy-activated Sepharose and are characterized by high resolution magic angle spinning (HR-MAS) NMR and Fourier transform infrared spectroscopy (FTIR). Surface plasmon resonance (SPR) biosensor is used to establish the promising ligand to be used in the chromatographic experiments and ascertain experimental conditions. Sc isoform showed the highest affinity to the dipeptides, followed by linear (ln) pDNA, being the open circular (oc) the one that promoted the lowest affinity to l-tyrosine-l-arginine. Saturation transfer difference (STD)-NMR experiments show that the interaction is mainly hydrophobic with the majority of the 5'-mononucleotides, except for 5'-GMP with l-tyrosine-l-arginine Sepharose that is mainly electrostatic. The support l-tyrosine Sepharose used in chromatographic experiments promotes the separation of native pVAX1-LacZ and pcDNA3-FLAG-p53 samples (oc+sc) by decreasing the salt concentration. The results suggest that it is possible to purify different plasmids with the l-tyrosine Sepharose, with slight adjustments in the gradient conditions.

Palma, SI, Carvalho A, Silva J, Martins P, Marciello M, Fernandes AR, Del Puerto Morales M, Roque AC.  2015.  Covalent coupling of gum arabic onto superparamagnetic iron oxide nanoparticles for MRI cell labeling: physicochemical and in vitro characterization. Contrast Media Mol Imaging. 10:320-8., Number 4 AbstractWebsite

Gum arabic (GA) is a hydrophilic composite polysaccharide derived from exudates of Acacia senegal and Acacia seyal trees. It is biocompatible, possesses emulsifying and stabilizing properties and has been explored as coating agent of nanomaterials for biomedical applications, namely magnetic nanoparticles (MNPs). Previous studies focused on the adsorption of GA onto MNPs produced by co-precipitation methods. In this work, MNPs produced by a thermal decomposition method, known to produce uniform particles with better crystalline properties, were used for the covalent coupling of GA through its free amine groups, which increases the stability of the coating layer. The MNPs were produced by thermal decomposition of Fe(acac)3 in organic solvent and, after ligand-exchange with meso-2,3-dimercaptosuccinic acid (DMSA), GA coating was achieved by the establishment of a covalent bond between DMSA and GA moieties. Clusters of several magnetic cores entrapped in a shell of GA were obtained, with good colloidal stability and promising magnetic relaxation properties (r2 /r1 ratio of 350). HCT116 colorectal carcinoma cell line was used for in vitro cytotoxicity evaluation and cell-labeling efficiency studies. We show that, upon administration at the respective IC50 , GA coating enhances MNP cellular uptake by 19 times compared to particles bearing only DMSA moieties. Accordingly, in vitro MR images of cells incubated with increasing concentrations of GA-coated MNP present dose-dependent contrast enhancement. The obtained results suggest that the GA magnetic nanosystem could be used as a MRI contrast agent for cell-labeling applications.

Ferreira, S, Carvalho J, Valente JFA, Corvo MC, Cabrita EJ, Sousa F, Queiroz JA, Cruz C.  2015.  Affinity analysis and application of dipeptides derived from l-tyrosine in plasmid purification. Journal of Chromatography B. 1006:47–58.: Elsevier Abstract
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Cardoso, BD, Vicente AI, Ward JBJ, Sebastiao PJ, Chavez FV, Barroso S, Carvalho A, Keely SJ, Martinho PN, Calhorda MJ.  2015.  Fe(III) salEen derived Schiff base complexes as potential contrast agents. Inorganica Chimica Acta. 432:258-266. AbstractWebsite

Three iron(III) complexes with ligands derived from N-ethyl-N-(2-aminoethyl) salicylaldiminate (H, 1; 5-Br, 2; 3-OMe, 3 substituents at the phenyl group) were prepared and the X-ray crystal structures of 1 and 2 are reported. NMR studies of solutions of these complexes in DMSO allowed for investigation of their magnetic behaviour and paramagnetic relaxation contribution. The relaxivities measured ranged from 0.35 to 0.80 mM(-1) s(-1) for proton Larmor frequencies from 0.01 to 300 MHz, in agreement with those known for other iron(III) based contrast agents. Biological studies on colonic epithelial T-84 cell monolayers showed that the compounds exert toxic effects only at concentrations higher than 100 mu M while coincidently reducing colonic epithelial secretory function. These two features make these complexes good candidates for further development in order to be used as MRI contrast agents. (C) 2015 Elsevier B.V. All rights reserved.

Fundo, JF, Amaro AL, Madureira AR, Carvalho A, Feio G, Silva CLM, Quintas MAC.  2015.  Fresh-cut melon quality during storage: An NMR study of water transverse relaxation time. Journal of Food Engineering. 167:71-76. AbstractWebsite

Molecular mobility is a fundamental parameter which reflects the dynamic properties of food components and contributes to food degradation reactions comprehension. Fresh-cut fruits have become an important food market segment. However, processing of fruits promotes faster its physiological deterioration, biochemical changes and microbial degradation. The purpose of this work was to use NMR methodology as a tool to evaluate fresh-cut fruit quality, during storage at refrigerated conditions. The fresh-cut melon transverse relaxation time (T-2) was measured for a period of 7 days of storage at 5 degrees C. The relationship between the obtained values, microstructure and quality parameters was investigated. In general, results show the existence of one class of water fluidity in the system, the one present in cells after processing. T-2, a measure of this fluidity, is affected by the processing and storage time. Also, it is possible to find a close relationships between T-2 and quality parameters of total colour difference (TCD), firmness and a(w). As T-2 increases TCD also increases, while firmness and aw decrease. These results highlight the usefulness of NMR methodology application in food science. (C) 2015 Elsevier Ltd. All rights reserved.

Azevedo, G, Domingues B, Abreu H, Sousa-Pinto I, Feio G, Hilliou L.  2015.  Impact of cultivation of Mastocarpus stellatus in IMTA on the seaweeds chemistry and hybrid carrageenan properties. Carbohydr Polym. 116:140-8. AbstractWebsite

The biomass yield potential of Mastocarpus stellatus, a commercially attractive carrageenophyte for foods and pharmaceutics, was investigated by cultivating the seaweeds in the nutrient-rich outflow of a commercial fish farm. Results from two consecutive 4 weeks experiments indicate that the cultivation of this seaweed produces a mean biomass of 21 to 40.6 gDW m(-2) day(-1) depending on the time of the experiment. DRIFT and CP-MAS NMR analyses of seaweeds indicate that cultivation during May affected quantitatively the seaweeds chemistry, and thus the chemical and gelling properties of native extracts of kappa/iota-hybrid carrageenan (KI). Overall, algal growth leads to the production of more sulphated KI, the percentage increase varying between 27% and 44% for the two experiments. However, alkali treatment of seaweeds before extraction reduces the variations in gelling properties of KI induced by the algal growth. This study demonstrates the capacity of growing M. stellatus in an integrated multi-trophic aquaculture system for the sustainable production of high value polysaccharides.

Corvo, M, Sardinha J, Casimiro T, Marin G, Seferin M, Einloft S, Menezes SC, Dupont J, Cabrita EJ.  2015.  A Rational Approach to CO2 Capture by Imidazolium Ionic Liquids: Tuning CO2 Solubility by Cation Alkyl Branching. ChemSusChem. 8:1935-46., Number 11 AbstractWebsite

Branching at the alkyl side chain of the imidazolium cation in ionic liquids (ILs) was evaluated towards its effect on carbon dioxide (CO2 ) solubilization at 10 and 80 bar (1 bar=1x10(5) Pa). By combining high-pressure NMR spectroscopy measurements with molecular dynamics simulations, a full description of the molecular interactions that take place in the IL-CO2 mixtures can be obtained. The introduction of a methyl group has a significant effect on CO2 solubility in comparison with linear or fluorinated analogues. The differences in CO2 solubility arise from differences in liquid organization caused by structural changes in the cation. ILs with branched cations have similar short-range cation-anion orientations as those in ILs with linear side chains, but present differences in the long-range order. The introduction of CO2 does not cause perturbations in the former and benefits from the differences in the latter. Branching at the cation results in sponge-like ILs with enhanced capabilities for CO2 capture.

Fundo, JF, Carvalho A, Feio G, Silva CLM, Quintas MAC.  2015.  Relationship between molecular mobility, microstructure and functional properties in chitosan/glycerol films. Innovative Food Science & Emerging Technologies. 28:81-85. AbstractWebsite

Foods are partially crystalline partially amorphous systems. Edible films are considered good models for food systems due to their interesting physical properties, quite straightforward matrices, and easy reproduction. Chitosan is a semicrystalline biopolymer, biocompatible, biodegradable, with antimicrobial activity and filmogenic properties, thoroughly used in edible films' studies. This work aims to investigate the relationship between chitosan films' molecular relaxation time, their microstructure (crystallinity) and functional properties. Analyses were carried out using data on chitosan/glycerol films prepared with different polymer/plasticisant concentrations. Results demonstrate that there is a relationship between macroscopic properties and water and glycerol relaxation times. Moreover, results show that while water is free in the matrix, glycerol is linked to the chitosan polymeric chains, decreasing intermolecular attractions and increasing free volume, thus facilitating molecular migration. Also the data analysis reveals the usefulness of NMR and molecular mobility studies in the matrix for characterisation and development of polymeric structures. Industrial relevance: NMR spectroscopy is currently one of the key methods for food characterisation. Foodstuff is a complex matrix including many different compounds with different chemical structures, concentrations, solubility, properties and nutritional values. From a fundamental perspective, foods are mainly edible and digestible biopolymers that are partially crystalline/partially amorphous and thus edible films, specifically chitosan/glycerol films can be very interesting food model systems for mobility and microstructure studies. Studies on water and solids' mobility and thermo-mechanical properties in food systems (real or model systems),are fundamental to fully attain food physical properties and stability. These studies may be extremely useful for food product and process design, safety and sensorial attributes and also for better understanding and predicting, for example, food storage stability conditions. (C) 2015 Elsevier Ltd. All rights reserved.

Carvalho, A, Sebastiao PJ, Fonseca I, Matos J, Goncalves MC.  2015.  Silica and silica organically modified nanoparticles: Water dynamics in complex systems. Microporous and Mesoporous Materials. 217:102-108. AbstractWebsite

Four silica-based porous nanosystems were synthesized with different organic substitutes and the molecular dynamics of water in these constrained environment was investigated. The nanosystems were silica and three organic modified silica nanoparticles (NP) with diameters in the range 80-300 nm with different porous dimensions, surface areas, and surface properties (e.g. hydrophilicity/hydrophobicity). Molecular dynamics was studied by pulsed field gradient NMR and by proton spin-lattice relaxation in a broad range of Larmor frequencies. A coherent analysis of the diffusion coefficients and spin-lattice relaxation data is presented taking into account a relaxation model associated to water molecular dynamics in close contact with NP surfaces. From our results it was possible to access the details of the water molecular movements in the nanosystems and to single out two water populations presenting distinct molecular dynamics. Characteristic distances for water rotations mediated by translational diffusion were estimated in consistency with the NP's dimensions and pores sizes obtained by TEM and BET experimental techniques. This knowledge has both fundamental and practical relevance since these NP have applications in nanomedicine, not only in therapy but also in diagnostic procedures and more recently in theranostic. (C) 2015 Elsevier Inc. All rights reserved.

2014
Fundo, JF, Fernandes R, Almeida PM, Carvalho A, Feio G, Silva CL, Quintas MA.  2014.  Molecular mobility, composition and structure analysis in glycerol plasticised chitosan films. Food Chem. 144:2-8. AbstractWebsite

This study was developed with the purpose to investigate the effect of polysaccharide/plasticiser concentration on the microstructure and molecular dynamics of polymeric film systems, using transmission electron microscope imaging (TEM) and nuclear magnetic resonance (NMR) techniques. Experiments were carried out in chitosan/glycerol films prepared with solutions of different composition. The films obtained after drying and equilibration were characterised in terms of composition, thickness and water activity. Results show that glycerol quantities used in film forming solutions were responsible for films composition; while polymer/total plasticiser ratio in the solution determined the thickness (and thus structure) of the films. These results were confirmed by TEM. NMR allowed understanding the films molecular rearrangement. Two different behaviours for the two components analysed, water and glycerol were observed: the first is predominantly moving free in the matrix, while glycerol is mainly bounded to the chitosan chain.

Cachitas, H, Sebastiao PJ, Feio G, Chavez FV.  2014.  Proton NMR relaxation study of molecular dynamics of chromonic liquid crystal Edicol Sunset Yellow. Liquid Crystals. 41:1080-1089., Number 8 AbstractWebsite

Proton nuclear magnetic resonance (H-1 NMR) relaxometry, over about five decades in Larmor frequency, and pulsed field gradient NMR were used to study the molecular dynamics in the chromonic nematic and isotropic phases of stacked molecules of the binary mixture composed by Edicol Sunset Yellow (ESY) and deuterated water. Our results evidence that in both phases collective motions are responsible for the spin-lattice relaxation dispersion in the Larmor frequency range below 1 MHz. In the nematic phase, the collective motion are attributed to columnar undulations within the stacked molecules, while, in the isotropic phase, the results are explained by local order fluctuations due to the formation of the stacks. The high frequency dispersion was explained by individual molecular motions like rotations around and perpendicular to the stack axis, and also self-diffusion.

2013
Daniel, CI, Chavez FV, Feio G, Portugal CA, Crespo JG, Sebastiao PJ.  2013.  1H NMR relaxometry, viscometry, and PFG NMR studies of magnetic and nonmagnetic ionic liquids. J Phys Chem B. 117:11877-84., Number 39 AbstractWebsite

A study is presented of the molecular dynamics and of the viscosity in pure [Aliquat][Cl] ionic liquid and in a mixture of [Aliquat][Cl] with 1% (v/v) of [Aliquat][FeCl4]. The (1)H spin-lattice relaxation rate, R1, was measured by NMR relaxometry between 8 and 300 MHz. In addition, the translation self-diffusion, D, was measured by pulse field gradient NMR. The ILs' viscosity was measured as a function of an applied magnetic field, B, and it was found that the IL mixture's viscosity decreased with increasing B, whereas the [Aliquat][Cl] viscosity is independent of B. All experimental results were analyzed taking into account the viscosity's magnetic field dependence, assuming a modified Stokes-Einstein diffusion/viscosity relation. The main difference between the relaxation mechanisms responsible for R1 in the two IL systems is related to the additional paramagnetic relaxation contribution associated with the (1)H spins-[FeCl4] paramagnetic moments' interactions. Cross-relaxation cusps in the R1 dispersion, associated with (35)Cl and (1)H nuclear spins in the IL systems, were detected. The R1 model considered was successfully fitted to the experimental results, and it was possible to estimate the value of D at zero field in the case of the IL mixture which was consistent with the values of D measured at 7 and 14.1 T and with the magnetic field dependence estimated from the viscosity measurements. It was observed that a small concentration of [Aliquat][FeCl4] in the [Aliquat][Cl] was enough to produce a "superparamagnetic"-like effect and to change the IL mixture's molecular dynamics and viscosity and to allow for their control with an external magnetic field.

Corvo, M, Sardinha J, Menezes SC, Einloft S, Seferin M, Dupont J, Casimiro T, Cabrita EJ.  2013.  Solvation of carbon dioxide in [C4 mim][BF(4)] and [C(4) mim][PF(6)] ionic liquids revealed by high-pressure NMR spectroscopy. Angew Chem Int Ed Engl. 52:13024-7., Number 49 AbstractWebsite

Where is CO2 ? The intermolecular interactions of [C4 mim]BF4 and [C4 mim]PF6 ionic liquids and CO2 have been determined by high-pressure NMR spectroscopy in combination with molecular dynamic simulations. The anion and the cation are both engaged in interactions with CO2 . A detailed picture of CO2 solvation in these ILs is provided. CO2 solubility is essentially determined by the microscopic structure of the IL.

Corvo, MC, Sardinha J, Menezes SC, Einloft S, Seferin M, Dupont J, Casimiro T, Cabrita EJ.  2013.  Solvation of Carbon Dioxide in [C4mim][BF4] and [C4mim][PF6] Ionic Liquids Revealed by High-Pressure NMR Spectroscopy. Angewandte Chemie International Edition. 52:13024–13027., Number 49: WILEY-VCH Verlag Abstract
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2011
Corvo, M, de Menezes SC, Magalhães TO, Seferin M, Einloft S, Casimiro T, Cabrita EJ.  2011.  Studying the Solubility of CO2 in Ionic Liquids Using High Pressure NMR. Abstract
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