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Cooperative use of cytochrome cd1 nitrite reductase and its redox partner cytochrome c552 to Improve the selectivity of nitrite biosensing, A.S., Serra, S. Jorge, C. Silveira, J.J.G. Moura, E. Jubete, E. Ochoteco, and G. Almeida M. , Anal Chim Acta, Volume 693, p.41-46, (2011)
Conversion of [3 Fe-3 S] into [4 Fe-4 S] clusters in a Desulfovibrio gigas ferredoxin and isotopic labeling of iron—sulfur cluster subsites, Kent, T. A., Moura I., Moura J. J. G., Lipscomb J. D., Huynh B. H., Legall J., Xavier A. V., and Münck E. , Febs Letters, Volume 138, Number 1, p.55-58, (1982) AbstractWebsite
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Conversion of desulforedoxin into a rubredoxin center, Yu, L., Kennedy M., Czaja C., Tavares P., Moura J. J., Moura I., and Rusnak F. , Biochem Biophys Res Commun, Feb 24, Volume 231, Number 3, p.679-82, (1997) AbstractWebsite

Rubredoxin and desulforedoxin both contain an Fe(S-Cys)4 center. However, the spectroscopic properties of the center in desulforedoxin differ from rubredoxin. These differences arise from a distortion of the metal site hypothesized to result from adjacent cysteine residues in the primary sequence of desulforedoxin. Two desulforedoxin mutants were generated in which either a G or P-V were inserted between adjacent cysteines. Both mutants exhibited optical spectra with maxima at 278, 345, 380, 480, and 560 nm while the low temperature X-band EPR spectra indicated highspin Fe3+ ions with large rhombic distortions (E/D = 0.21-0.23). These spectroscopic properties are distinct from wild type desulforedoxin and virtually identical to rubredoxin.

Conversion of adrenaline to indolic derivatives by the human erythrocyte plasma membrane, Marques, F., Duarte R. O., Moura J. J., and Bicho M. P. , Biol Signals, Sep-Oct, Volume 5, Number 5, p.275-82, (1996) AbstractWebsite

The conversion of adrenaline to aminochromes by the human erythrocyte plasma membranes at pH 9.5 was shown to be a complex reaction that proceeded at least by two distinct phases. The first one, corresponding to the formation of adrenochrome, is catalyzed in the presence of the membranes, suggesting the involvement of an enzyme-mediated process. Active oxygen species were identified as intermediates during this phase. Oxygen radical scavengers (catalase and superoxide dismutase) suggested H2O2 and O2- involvement. Adrenochrome formation was stimulated by NADH indicating the participation of another enzyme (NADH dehydrogenase) which is known to be present in the human erythrocyte plasma membrane. The second phase, corresponding to the disappearance of adrenochrome, is also stimulated by NADH and inhibited in the presence of the membranes. In this reaction, adrenochrome is converted to aminochromes via adrenochrome semiquinone. The formation of radical species is demonstrated by EPR spectroscopy. The results led to the proposal of a mechanism for the formation of adrenochrome and other oxidation products from adrenaline.

Control of the spin state of the peroxidatic haem by calcium ions in cytochrome c peroxidase from Paracoccus denitrificans: A 1H NMR study, Prazeres, Susana, Moura Isabel, Moura José J. G., Gilmour Raymond, Goodhew Celia F., and Pettigrew Graham W. , Magnetic Resonance in Chemistry, Volume 31, Number 13, p.S68-S72, (1993) AbstractWebsite

Cytochrome c peroxidase from Paracoccus denitrificans LMD 52.44 was recently identified. The enzyme contains two c-type haems: one is reducible physiologically by cytochrome c550 from the same organism or non-physiologically by ascorbate (high-potential haem) and the other by dithionite (low-potential haem). The enzymatically active form of the peroxidase is the half-reduced enzyme state, in which the high-potential haem is in the iron(II) state and the low-potential haem is in the iron(III) state. It was found that the two haems interact and that the enzyme binds calcium ions near the haem sites which are necessary to promote its activation. In the oxidized form, the high-potential haem is in a high-spin and the low-potential haem is in a low-spin state. The half-reduction of the enzyme with ascorbate-diaminodurol changes the high-potential haem (high-spin) into a low-spin state and the low-potential haem converts from a low- into a high-spin state. This high-spin conversion of the low-potential haem is induced by the presence of calcium ions. These processes of reduction and spin state change can be easily resolved in time by removing the calcium from the enzyme using EDTA, facilitating the observation of the intermediate form by NMR.

Continuous-wave EPR at 275GHz: application to high-spin Fe(3+) systems, Mathies, G., Blok H., Disselhorst J. A., Gast P., van der Meer H., Miedema D. M., Almeida R. M., Moura J. J., Hagen W. R., and Groenen E. J. , J Magn Reson, May, Volume 210, Number 1, p.126-32, (2011) AbstractWebsite

The 275GHz electron-paramagnetic-resonance spectrometer we reported on in 2004 has been equipped with a new probe head, which contains a cavity especially designed for operation in continuous-wave mode. The sensitivity and signal stability that is achieved with this new probe head is illustrated with 275GHz continuous-wave spectra of a 1mM frozen solution of the complex Fe(III)-ethylenediamine tetra-acetic acid and of 10mM frozen solutions of the protein rubredoxin, which contains Fe(3+) in its active site, from three different organisms. The high quality of the spectra of the rubredoxins allows the determination of the zero-field-splitting parameters with an accuracy of 0.5GHz. The success of our approach results partially from the enhanced absolute sensitivity, which can be reached using a single-mode cavity. At least as important is the signal stability that we were able to achieve with the new probe head.

Construction of effective disposable biosensors for point-of-care testing of nitrite, Monteiro, T., Rodrigues P. R., Gonçalves A. L., Moura J. J. G., Anorga L., Jubete E., Piknova B., Schechter A. N., Silveira C. M., and Almeida M. G. , Talanta, Volume 142, p.246-251, (2015)
Construção de um Bio-Eléctrodo Específico para Determinação de Nitritos, Almeida, M. G., Tavares P., and Moura J. J. G. , Bol. Soc. Port. Química, Volume 84, p.68-71, (2002) Abstract
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The complete catalytic mechanism of Xanthine Oxidase: a computational study, Fernandes, H., Maia L., Ribeiro P. M., J.J.G. Moura, and Cerqueira N. M. , Inorg Chem Front, Volume 8, p.405, (2021)
A Comparison between Vanadyl, Vanadate, and Decavanadate Effects in Actin Structure and Function: Combination of Several Spectroscopic Studies, Ramos, S., Moura J. J. G., and Aureliano M. , Spectroscopy: An International Journal, Volume 27, p.355-359, (2012)
A comparative spectroscopic study of two non-haem iron proteins lacking labile sulphide from Desulphovibrio gigas, Moura, I., Xavier A. V., Cammack R., Bruschi M., and Legall J. , Biochimica et Biophysica Acta (BBA) - Protein Structure, Volume 533, Number 1, p.156-162, (1978) AbstractWebsite
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Comparative electrochemical study of superoxide reductases, Cordas, C. M., Raleiras P., Auchere F., Moura I., and Moura J. J. , Eur Biophys J, Dec 6, Volume 41, Number 12, p.209-215, (2012)
Comparative electrochemical behavior of cytochrome c on aqueous solutions containing choline-based room temperature ionic liquids, Matias, S. C., Lourenço N. M. T., Fonseca J. P., and Cordas C. M. , ChemistrySelect, Volume 2, p.8701–8705, (2017) Website
Cobalt-, zinc- and iron-bound forms of adenylate kinase (AK) from the sulfate-reducing bacterium Desulfovibrio gigas: purification, crystallization and preliminary X-ray diffraction analysis, Kladova, A. V., Gavel O. Y., Mukhopaadhyay A., Boer D. R., Teixeira S., Shnyrov V. L., Moura I., Moura J. J., Romao M. J., Trincao J., and Bursakov S. A. , Acta Crystallogr Sect F Struct Biol Cryst Commun, Sep 1, Volume 65, Number Pt 9, p.926-9, (2009) AbstractWebsite

Adenylate kinase (AK; ATP:AMP phosphotransferase; EC 2.7.4.3) is involved in the reversible transfer of the terminal phosphate group from ATP to AMP. AKs contribute to the maintenance of a constant level of cellular adenine nucleotides, which is necessary for the energetic metabolism of the cell. Three metal ions, cobalt, zinc and iron(II), have been reported to be present in AKs from some Gram-negative bacteria. Native zinc-containing AK from Desulfovibrio gigas was purified to homogeneity and crystallized. The crystals diffracted to beyond 1.8 A resolution. Furthermore, cobalt- and iron-containing crystal forms of recombinant AK were also obtained and diffracted to 2.0 and 3.0 A resolution, respectively. Zn(2+)-AK and Fe(2+)-AK crystallized in space group I222 with similar unit-cell parameters, whereas Co(2+)-AK crystallized in space group C2; a monomer was present in the asymmetric unit for both the Zn(2+)-AK and Fe(2+)-AK forms and a dimer was present for the Co(2+)-AK form. The structures of the three metal-bound forms of AK will provide new insights into the role and selectivity of the metal in these enzymes.

A cobalt containing protein isolated from Desulfovibrio gigas, a sulfate reducer, Moura, J. J., Moura I., Bruschi M., Legall J., and Xavier A. V. , Biochem Biophys Res Commun, Feb 12, Volume 92, Number 3, p.962-70, (1980) AbstractWebsite
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Cobalt containing B12 cofactors from methanogenic bacteria - spectroscopic characterization, Lino, A. R., Xavier A. V., Moura I., Legall J., and Ljungdahl P. O. , Rev Portuguesa de Química, Volume 27, p.175-177, (1985) Abstract
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Cloning, sequencing and overexpression of the Desulfovibrio gigas ferredoxin gene in E. coli, Chen, B., Menon N. K., Dervertarnian L., Moura J. J., and Przybyla A. E. , FEBS Lett, Sep 12, Volume 351, Number 3, p.401-4, (1994) AbstractWebsite

We have cloned the gene encoding Desulfovibrio gigas ferredoxin using a photodigoxigenin-labelled probe synthesized with the polymerase chain reaction. The DNA sequence of the gene predicts a polypeptide of 58 residues after removal of the initial formyl methionine (polypeptide M(r) = 6,276). The ferredoxin gene was expressed in aerobically grown E. coli behind the lac promoter of pUC18 resulting in a high level of ferredoxin expression which comprises about 10% of the total cell protein. EPR analysis of recombinant ferredoxin revealed the presence of a [3Fe-4S] cluster which is characteristic of native D. gigas ferredoxin II.

Chromosome aberrations in cattle raised on bracken fern pasture, Moura, J. W., Stocco dos Santos R. C., Dagli M. L., D'Angelino J. L., Birgel E. H., and Becak W. , Experientia, Sep 15, Volume 44, Number 9, p.785-8, (1988) AbstractWebsite

Thirteen cows maintained on natural bracken fern (Pteridium aquilinum) were analyzed cytogenetically. The frequency of structural chromosome aberrations detected in peripheral blood cells was significantly higher when compared to that detected in animals raised on pasture containing no bracken fern. We discuss the clastogenic action of fern and its synergistic action with infection by type 2 and 4 papilloma virus in the same animals.

Chromatographic-based methods for pesticide determination in honey: An overview, Rial-Otero, R., Gaspar E. M., Moura I., and Capelo J. L. , Talanta, Feb 15, Volume 71, Number 2, p.503-514, (2007) AbstractWebsite

Nowadays the control of pesticides in honey is an issue of primary health importance as consequence of the increasing content of these chemicals in the aforementioned matrix. This poisoning has led to the worldwide increasing loss of bees since 1995. From Europe to Canada, scientist, beekeepers and chemical companies disagree about the reasons that have led to colony losses higher than 50% in some areas. This problem has become a public health issue due to the high honey worldwide consumption. The presence of pesticides in honey has been directly related to bees' mortality by some researchers through pesticide presence in (1) pollen, (2) honeycomb walls, (3) own bees and (4) honey. In this work we describe the actual state-of-the-art for pesticides determination in honey along with a review in this subject focused on sample treatments and instrumentation. Finally, future trends are also commented. (c) 2006 Elsevier B.V. All rights reserved.

Characterization of two dissimilatory sulfite reductases from sulfate-reducing bacteria, Huynh, B. H., Moura I., Lino A. R., Moura J. J. G., and Legall J. , Hyperfine Interactions, 1988, Volume 42, Number 1-4, p.905-908, (1988) AbstractWebsite
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Characterization of two dissimilatory sulfite reductases from sulfate-reducing bacteria, Huynh, B., Moura I., Lino A., Moura J., and Legall J. , Hyperfine Interactions, Volume 42, Number 1, p.905-908, (1988) AbstractWebsite

Mössbauer, EPR, and biochemical techniques were used to characterize two dissimilatory sulfite reductases: desulforubidin from Desulfovibrio baculatus strain DSM 1743 and desulfoviridin from Desulfovibrio gigas . For each molecule of desulforubidin, there are two sirohemes and four [4Fe−4S] clusters. The [4Fe−4S] clusters are in the diamagnetic 2+ oxidation state. The sirohemes are high-spin ferric (S=5/2) and each siroheme is exchanged-coupled to a [4Fe−4S] 2+ cluster. Such an exchange-coupled siroheme-[4Fe−4S] unit has also been found in the assimilatory sulfite reductase from Escherichia coli /1/ and in a low-molecular weight sulfite reductase from Desulfovibrio vulgaris /2/. For each molecule of defulfoviridin, there are two tetrahydroporphyrin groups and four [4Fe−4S] 2+ clusters. To our surprise, we discovered that about 80% of the tetrahydroporphyrin groups, however, do not bind iron.

Characterization of two dissimilatory sulfite reductases (desulforubidin and desulfoviridin) from the sulfate-reducing bacteria. Moessbauer and EPR studies, Moura, I., Legall J., Lino A. R., Peck H. D., Fauque G., Xavier A. V., Dervartanian D. V., Moura J. J. G., and Huynh B. H. , Journal of the American Chemical Society, 1988/02/17, Volume 110, Number 4, p.1075-1082, (1988) AbstractWebsite
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Characterization of the iron-binding site in mammalian ferrochelatase by kinetic and Mossbauer methods, Franco, R., Moura J. J., Moura I., Lloyd S. G., Huynh B. H., Forbes W. S., and Ferreira G. C. , J Biol Chem, Nov 3, Volume 270, Number 44, p.26352-7, (1995) AbstractWebsite

All organisms utilize ferrochelatase (protoheme ferrolyase, EC 4.99.1.1) to catalyze the terminal step of the heme biosynthetic pathway, which involves the insertion of ferrous ion into protoporphyrin IX. Kinetic methods and Mossbauer spectroscopy have been used in an effort to characterize the ferrous ion-binding active site of recombinant murine ferrochelatase. The kinetic studies indicate that dithiothreitol, a reducing agent commonly used in ferrochelatase activity assays, interferes with the enzymatic production of heme. Ferrochelatase specific activity values determined under strictly anaerobic conditions are much greater than those obtained for the same enzyme under aerobic conditions and in the presence of dithiothreitol. Mossbauer spectroscopy conclusively demonstrates that, under the commonly used assay conditions, dithiothreitol chelates ferrous ion and hence competes with the enzyme for binding the ferrous substrate. Mossbauer spectroscopy of ferrous ion incubated with ferrochelatase in the absence of dithiothreitol shows a somewhat broad quadrupole doublet. Spectral analysis indicates that when 0.1 mM Fe(II) is added to 1.75 mM ferrochelatase, the overwhelming majority of the added ferrous ion is bound to the protein. The spectroscopic parameters for this bound species are delta = 1.36 +/- 0.03 mm/s and delta EQ = 3.04 +/- 0.06 mm/s, distinct from the larger delta EQ of a control sample of Fe(II) in buffer only. The parameters for the bound species are consistent with an active site composed of nitrogenous/oxygenous ligands and inconsistent with the presence of sulfur ligands. This finding is in accord with the absence of conserved cysteines among the known ferrochelatase sequences. The implications these results have with regard to the mechanism of ferrochelatase activity are discussed.

Characterization of the interaction between PQQ and heme c in the quinohemoprotein ethanol dehydrogenase from Comamonas testosteroni, de Jong, G. A., Caldeira J., Sun J., Jongejan J. A., de Vries S., Loehr T. M., Moura I., Moura J. J., and Duine J. A. , Biochemistry, Jul 25, Volume 34, Number 29, p.9451-8, (1995) AbstractWebsite

Quinohemoprotein ethanol dehydrogenase from Comamonas testosteroni (QH-EDH) contains two cofactors, 2,7,9-tricarboxy-1H-pyrrolo[2,3-f]quinoline-4,5-dione (PQQ) and heme c. Since previous studies on the kinetics of this enzyme suggested that both participate in electron transfer, spectroscopic investigations were performed of the oxidized and reduced holo- and apoenzyme (without PQQ but with heme c) to reveal the nature of the interaction between the two redox centers. From this it appears that the properties of the heme in the enzyme are affected by the presence of PQQ, as judged from the shift of the maxima in the ultraviolet/visible absorption spectra of the heme moiety in both reduced and oxidized QH-EDH and the 60-mV increase of the heme midpoint redox potential caused by PQQ addition. Also 1H-NMR spectroscopy was indicative for interaction since binding of PQQ induced shifts in the resonances of the methyl groups of the porphyrin ring in the oxidized form of the apoenzyme and a shift in the methionine heme ligand resonance of the reduced form of the apoenzyme. On the other hand, resonance Raman spectra of the heme in the different enzyme forms were nearly similar. These results suggest that a major effect of PQQ binding to apo-QH-EDH is a rotation of the methionine ligand of heme c. Since no intermediate 1H-NMR spectra were observed upon titration of apoenzyme with PQQ, apparently no exchange occurs of PQQ between (oxidized) holo- and apoenzyme at the NMR time scale and at that of the experiment.(ABSTRACT TRUNCATED AT 250 WORDS)

Characterization of the Dihemic Cytochrome C549 from the Marine Denitrifying Bacterium Pseudomonas nautica 617, Saraiva, L. M., Besson S., Fauque G., and Moura I. , Biochemical and Biophysical Research Communications, Volume 199, Number 3, p.1289-1296, (1994) AbstractWebsite
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