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2013
Mehtab, S, Goncalves G, Roy S, Tomaz AI, Santos-Silva T, Santos MFA, Romao MJ, Jakusch T, Kiss T, Pessoa JC.  2013.  Interaction of vanadium(IV) with human serum apo-transferrin. Journal of Inorganic Biochemistry. 121:187-195. AbstractWebsite
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Marangon, J, Correia HD, Brondino CD, Moura JJG, Romao MJ, Gonzalez PJ, Santos-Silva T.  2013.  Kinetic and Structural Studies of Aldehyde Oxidoreductase from Desulfovibrio gigas Reveal a Dithiolene-Based Chemistry for Enzyme Activation and Inhibition by H2O2. Plos One. 8, Number 12 AbstractWebsite
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Gavara, R, Llorca J, Lima JC, Rodriguez L.  2013.  A luminescent hydrogel based on a new Au(I) complex. Chemical Communications. 49:72-74., Number 1 Abstract
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Brissos, R, Ramos D, Lima JC, Mihan FY, Borras M, de Lapuente J, Dalla Cort A, Rodriguez L.  2013.  Luminescent zinc salophen derivatives: cytotoxicity assessment and action mechanism studies. New Journal of Chemistry. 37:1046-1055., Number 4 Abstract
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Gawande, MB, Rathi AK, Branco PS, Potewar TM, Velhinho A, Nogueira ID, Tolstogouzov A, Ghumman ACA, Teodoro OMND.  2013.  Nano-MgO-ZrO2 mixed metal oxides: characterization by SIMS and application in the reduction of carbonyl compounds and in multicomponent reactions. RSC ADVANCES. 3:3611-3617., Number 11 Abstract
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Martins, P, Rosa D, Fernandes {AR}, Baptista {PV}.  2013.  Nanoparticle drug delivery systems: Recent patents and applications in nanomedicine. Recent Patents on Nanomedicine. 3:105–118., Number 2: Bentham Science Publishers Abstract

Traditional methods of drug delivery present several drawbacks, mainly due to off-target effects that may originate severe side and toxic effect to healthy tissues. Parallel to the development of novel more effective drugs, particular effort has been dedicated to develop and optimize drug delivery vehicles capable of specifically targeting the required tissue/organ and to deliver the cargo only where and when it is needed. New drug delivery systems based on nanoscale devices showing new and improved pharmacokinetic and pharmacodynamics properties like enhanced bioavailability, high drug loading or systemic stability have surged in the past decade as promising solutions to the required therapeutic efficacy. Amongst these nanoscale vectors, nanoparticles for drug delivery, such as polymeric, lipidbased, ceramic or metallic nanoparticles, have been at the forefront of pharmaceutical development. The interest in nanomedicine for treatment and diagnosis is clearly reflected on the increasing number of publications and issued patents every year. Here, we provide a broad overview of novel nanoparticle based drug delivery systems, ranging from polymeric systems to metal nanoparticles, while simultaneously listing the most relevant related patents.

Verma, AK, Goyal A, Freire F, Bule P, Venditto I, Bras JLA, Santos H, Cardoso V, Bonifacio C, Thompson A, Romao MJ, Prates JAM, Ferreira LMA, Fontes CMGA, Najmudin S.  2013.  Overexpression, crystallization and preliminary X-ray crystallographic analysis of glucuronoxylan xylanohydrolase (Xyn30A) from Clostridium thermocellum. Acta Crystallographica Section F-Structural Biology and Crystallization Communications. 69:1440-1442. AbstractWebsite
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Sousa, AMM, Borges J, Silva F, Ramos AM, Cabrita EJ, c}alves MPG{\c.  2013.  Shaping the molecular assemblies of native and alkali- modified agars in dilute and concentrated aqueous media via microwave-assisted extraction. Soft Matter. 9:3131-3139. AbstractWebsite

The use of agar-based biomaterials for the development of emerging areas, such as tissue engineering or ‘smart materials’ production has recently gained great interest. Understanding how these gel-forming polysaccharides self-organise in aqueous media and how these associations can be tuned to meet the specific needs of each application is thus of great relevance. As an extension of previous pioneering research concerning the application of the microwave-assisted extraction (MAE) technique in the recovery of native (NA) and alkali-modified (AA) agars, this article focuses on the different molecular assemblies assumed by these novel NA and AA when using different MAE routes. The molecular architectures in dilute (5, 10, 50 and 100 mg mL1) and concentrated (1.5% (w/w)) aqueous media were imaged by AFM and cryoSEM, respectively. Relevant structural and physicochemical properties were investigated to support the microscopic data. Different extraction routes led to polysaccharides with unique properties, which in turn resulted in different molecular assemblies. Even at 5 mg mL1, AFM images included individual fibers, cyclic segments, aggregates and local networks. At higher polymer concentrations, the structures further aggregated forming multilayer polymeric networks for AA. The more compact and denser 3D networks of AA, imaged by cryoSEM, and their higher resistance to large deformations matched the 2D-shapes observed by AFM. Depending on the nature of the AA chains, homogeneous or heterogeneous growth of assemblies was seen during network formation. The obtained results support well the view of double helix formation followed by intensive double helix association proposed for agar gelation.

Viegas, A, Sardinha J, Freire F, Duarte DF, Carvalho AL, Fontes CMGA, Romao MJ, Macedo AL, Cabrita EJ.  2013.  Solution structure, dynamics and binding studies of a family 11 carbohydrate-binding module from Clostridium thermocellum (CtCBM11). Biochemical Journal. 451:289-300. AbstractWebsite
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Viegas, A, Sardinha J, Duarte DF, Carvalho AL, Fontes CMGA, Romao MJ, Macedo AL, Cabrita EJ.  2013.  Solution Structure, Dynamics and Binding Studies of a Family 11 Carbohydrate-Binding Module from Clostridium thermocellum (CtCBM11). Biochemical Journal. 451:289-300. AbstractWebsite

Non-catalytic cellulosomal carbohydrate-binding modules (CBMs) are responsible for increasing the catalytic efficiency of cellulosic enzymes by selectively putting the substrate (a wide range of poly- and oligosaccharides) and enzyme into close contact. In the present work we carried out an atomistic rationalization of the molecular determinants of ligand specificity of a family 11 CBM from thermophilic C. thermocellum (CtCBM11), based on a NMR and molecular modeling approach. We have determined the NMR solution structure of CtCBM11 at 25 and 50 ºC and derived information on the residues of the protein involved in ligand recognition and on the influence of the length of the saccharide chain on binding. We obtained models of the CtCBM11/cellohexaose and CtCBM11/cellotetraose complexes by docking in accordance with the NMR experimental data. Specific ligand/protein CH-π and Van der Waals interactions were found to be determinant for the stability of the complexes and for defining specificity. Using the order parameters derived from backbone dynamics analysis in the presence and absence of ligand and at 25 and 50 ºC, we determined that the protein’s backbone conformational entropy is slightly positive. This data in combination with the negative binding entropy calculated from ITC studies supports a selection mechanism where a rigid protein selects a defined oligosaccharide conformation.

Palma, AS, Pinheiro B, Liu Y, Takeda Y, Chai W, Ito Y, Romao MJ, Carvalho AL, Feizi T.  2013.  The Structural Basis of the Recognition of Di-glucosylated N-glycans by the ER Lectin Malectin. Glycobiology. 23:1368-1369., Number 11 AbstractWebsite
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Pinheiro, BA, Carvalho AL, Romao MJ, Fontes CM.  2013.  Study of the cohesin-dockerin interaction and its role in the C. thermocellum cellulosome assembly. European Biophysics Journal with Biophysics Letters. 42:S180-S180. AbstractWebsite
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Giannicchi, I, Brissos R, Ramos D, de Lapuente J, Lima JC, Dalla Cort A, Rodriguez L.  2013.  Substituent Effects on the Biological Properties of Zn-Salophen Complexes. Inorganic Chemistry. 52:9245-9253., Number 16 Abstract
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Casimiro, MH, Corvo M, Ramos AM, Cabrita EJ, Ramos AM, Ferreira LM.  2013.  Synthesis and characterization of novel $\gamma$-induced porous PHEMA–IL composites. Materials Chemistry and Physics. 138:11–16., Number 1: Elsevier Abstract
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Casimiro, MH, Corvo M, Ramos AM, Cabrita EJ, Ramos AM, Ferreira LM.  2013.  Synthesis and characterization of novel gamma-induced porous PHEMA-IL composites. Materials Chemistry and Physics. 138:11-16., Number 1 AbstractWebsite

A novel porous polymer-ionic liquid composite with poly(2-hydroxyethyl methacrylate) (PHEMA) and 1-butyl-3-methylimidazolium hexafluorophosphate (BMIPF6) has been synthesized by gamma-irradiation without heat or chemical initiators. The products can be reversibly converted into organogels. The composites are potential candidates for electrochemical applications. The use of gamma-radiation can be a simple and versatile alternative way to obtain these materials. (C) 2012 Elsevier B.V. All rights reserved.

Casimiro, MH, Corvo MC, Ramos AM, Cabrita EJ, Ramos AM, Ferreira LM.  2013.  Synthesis and characterization of novel γ-induced porous PHEMA–IL composites. Materials Chemistry and Physics. 138:11-16. AbstractWebsite

A novel porous polymer-ionic liquid composite with poly(2-hydroxyethyl methacrylate) (PHEMA) and 1-butyl-3-methylimidazolium hexafluorophosphate (BMIPF6) has been synthesized by γ-irradiation without heat or chemical initiators. The products can be reversibly converted into organogels. The composites are potential candidates for electrochemical applications. The use of γ-radiation can be a simple and versatile alternative way to obtain these materials.

Ruivo, A, Ventura MG, Gomes da Silva MDR, Laia CAT.  2013.  Synthesis of gold nanoparticles in sol-gel glass porogens containing bmim BF4 ionic liquid. Journal of Sol-Gel Science and Technology. 68:234-244., Number 2 AbstractWebsite
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Garcia-Estevez, I, Gavara R, Alcalde-Eon C, Rivas-Gonzalo JC, Quideau S, Teresa Escribano-Bailon M, Pina F.  2013.  Thermodynamic and Kinetic Properties of a New Myrtillin-Vescalagin Hybrid Pigment. Journal of Agricultural and Food Chemistry. 61:11569-11578., Number 47 AbstractWebsite
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Romao, MJ.  2013.  Unraveling new functions and modes of action of molybdenum-dependent enzymes. European Biophysics Journal with Biophysics Letters. 42:S35-S35. AbstractWebsite
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Santos, MFA, Oliveira AR, Somnath R, Romao MJ, Pessoa JC, Santos-Silva T.  2013.  Vanadium compounds as prospective therapeutics: X-ray structure of protein adducts. European Biophysics Journal with Biophysics Letters. 42:S181-S181. AbstractWebsite
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Alves, RD, Rodrigues L\'ısaC, Andrade JR, Fernandes M, Pinto JV, Pereira L\'ıs, Pawlicka A, Martins R, Fortunato E, {de Zea Bermudez} V, Silva MM.  2013.  {Gelatin n Zn(CF 3 SO 3 ) 2 Polymer Electrolytes for Electrochromic Devices}. Electroanalysis. 25:1483\{$\backslash$textendash\}1490., Number 6 AbstractWebsite

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a.M. Ramos, Pereira S, Cidade MT, Pereira G, Branquinho R, Pereira L, Martins R, Fortunato E.  2013.  {Preparation and characterization of cellulose nanocomposite hydrogels as functional electrolytes}. Solid State Ionics. 242:26\{$\backslash$textendash\}32.: Elsevier B.V. AbstractWebsite

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2012
Rameshan, N, Veiga L.  2012.  RATS - Resource Aware Thread Scheduling for JVM-level Clustering, sep. INFORUM 2012 - Simpósio de Informática. Abstractinforum-2012-navaneeth.pdf

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Gawande, MB, Rathi A, Nogueira ID, Ghumman CAA, Bundaleski N, Teodoro OMND, Branco PS.  2012.  A Recyclable Ferrite-Co Magnetic Nanocatalyst for the Oxidation of Alcohols to Carbonyl Compounds, OCT. CHEMPLUSCHEM. 77:865-871., Number 10 Abstract
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Gawande, MB, Rathi AK, Branco PS, Nogueira ID, Velhinho A, Shrikhande JJ, Indulkar UU, Jayaram RV, Ghumman ACA, Bundaleski N, Teodoro OMND.  2012.  Regio- and Chemoselective Reduction of Nitroarenes and Carbonyl Compounds over Recyclable Magnetic Ferrite-Nickel Nanoparticles (Fe3O4-Ni) by Using Glycerol as a Hydrogen Source, OCT. CHEMISTRY-A EUROPEAN JOURNAL. 18:12628-12632., Number 40 Abstract
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