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2017
Sharipova, AA, Aidarova SB, Bekturganova NY, Tleuova A, Kerimkulova M, Yessimova O, Kairaliyeva T, Lygina O, Lyubchik S, Miller R.  2017.  Triclosan adsorption from model system by mineral sorbent diatomite. Colloids and Surfaces A: Physicochemical and Engineering Aspects. 532:97-101. AbstractWebsite

Adsorption of model systems of triclosan by mineral sorbent diatomite is studied. The triclosan equilibrium concentration was measured spectrophotometrically, the morphology of the diatomite characterized using scanning electron microscopy and the amount of the adsorbed triclosan on the diatomite quantified by a mass balance. Adsorption isotherms were analyzed according to the linear/nonlinear form of Langmuir, Freundlich, Sips and Toth isotherm models isotherms, using AMPL software. It is shown that nonlinear Langmuir and Sips isotherm model provided suitable fitting results and no pronounced difference in adsorption efficiency between isotherms measured after 1, 2 and 3days adsorption was observed. Determined maximum adsorption capacity of diatomite towards triclosan qs is 140mg/g. Averaged calculated values of ΔG are −9.9 and −9.6kJ/mol for Langmuir and Sips models respectively. The negative sign of such values indicates spontaneous, physical in nature adsorption.

Hussain, A, Semeano ATS, Palma SICJ, Pina AS, Almeida J, Medrado BF, Pádua ACCS, Carvalho AL, Dionísio M, Li RWC, Gamboa H, Ulijn RV, Gruber J, Roque ACA.  2017.  Tunable Gas Sensing Gels by Cooperative Assembly. Advanced Functional Materials. 27:1700803–n/a., Number 27 AbstractWebsite

The cooperative assembly of biopolymers and small molecules can yield functional materials with precisely tunable properties. Here, the fabrication, characterization, and use of multicomponent hybrid gels as selective gas sensors are reported. The gels are composed of liquid crystal droplets self-assembled in the presence of ionic liquids, which further coassemble with biopolymers to form stable matrices. Each individual component can be varied and acts cooperatively to tune gels' structure and function. The unique molecular environment in hybrid gels is explored for supramolecular recognition of volatile compounds. Gels with distinct compositions are used as optical and electrical gas sensors, yielding a combinatorial response conceptually mimicking olfactory biological systems, and tested to distinguish volatile organic compounds and to quantify ethanol in automotive fuel. The gel response is rapid, reversible, and reproducible. These robust, versatile, modular, pliant electro-optical soft materials possess new possibilities in sensing triggered by chemical and physical stimuli.

Lourenço, SC, Torres CAV, Nunes D, Duarte P, Freitas F, Reis MAM, Fortunato E, Moldão-Martins M, da Costa LB, Alves VD.  2017.  Using a bacterial fucose-rich polysaccharide as encapsulation material of bioactive compounds. International Journal of Biological Macromolecules. 104:1099-1106. AbstractWebsite

The potential of a bacterial exopolysaccharide named FucoPol, produced by the bacterium Enterobacter A47, as encapsulation matrix was explored. Spherical capsules with a smooth surface were produced by spray drying. The obtained microcapsules had average diameters ranging from 0.5 to 26.7μm and presented thin walls (thickness from 222 to 1094nm). The capsules were loaded with two bioactive compounds: gallic acid (GA) and oregano essential oil (OEO). Both bioactive materials were encapsulated in FucoPol particles, retaining their antioxidant activity after the drying process. Release studies showed that GA release in simulated gastric and intestinal fluids was faster than that of OEO, envisaging that the latter had established stronger interactions with the polymer matrix. These results suggest that FucoPol has a good potential for use as encapsulating material of bioactive compounds for application in several areas, including food, cosmetic or pharmaceutical products.

2016
Campos, SP, de Pinto ML, Gomes G, de Pinho PG, Monteiro JA, Felix LM, Branco PS, Ferreira LM, Antunes LM.  2016.  Expression of CYP1A1 and CYP1A2 in the liver and kidney of rabbits after prolonged infusion of propofol, OCT. EXPERIMENTAL AND TOXICOLOGIC PATHOLOGY. 68:521-531., Number 9 Abstract
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Lyubchyk, A, Vicente A, Soule B, Alves PU, Mateus T, Mendes MJ, Águas H, Fortunato E, Martins R.  2016.  {Mapping the Electrical Properties of ZnO-Based Transparent Conductive Oxides Grown at Room Temperature and Improved by Controlled Postdeposition Annealing}, jan. Advanced Electronic Materials. 2:n/a–n/a., Number 1 AbstractWebsite
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Santos, L, Silveira CM, Elangovan E, Neto JP, Nunes D, Pereira LÍ, Martins R, Viegas J, Moura JJG, Todorovic S, Almeida GM, Fortunato E.  2016.  {Synthesis of WO3 nanoparticles for biosensing applications}, feb. Sensors and Actuators B: Chemical. 223:186–194. AbstractWebsite
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Brás, JLA, Pinheiro BA, Cameron K, Cuskin F, Viegas A, Najmudin S, Bule P, Pires VMR, Romão MJ, Bayer EA, Spencer HL, Smith S, Gilbert HJ, Alves VD, Carvalho AL, Fontes CMGA.  2016.  Diverse specificity of cellulosome attachment to the bacterial cell surface, dec. Scientific Reports. 6:38292.: The Author(s) AbstractWebsite

During the course of evolution, the cellulosome, one of Nature's most intricate multi-enzyme complexes, has been continuously fine-tuned to efficiently deconstruct recalcitrant carbohydrates. To facilitate the uptake of released sugars, anaerobic bacteria use highly ordered protein-protein interactions to recruit these nanomachines to the cell surface. Dockerin modules located within a non-catalytic macromolecular scaffold, whose primary role is to assemble cellulosomal enzymatic subunits, bind cohesin modules of cell envelope proteins, thereby anchoring the cellulosome onto the bacterial cell. Here we have elucidated the unique molecular mechanisms used by anaerobic bacteria for cellulosome cellular attachment. The structure and biochemical analysis of five cohesin-dockerin complexes revealed that cell surface dockerins contain two cohesin-binding interfaces, which can present different or identical specificities. In contrast to the current static model, we propose that dockerins utilize multivalent modes of cohesin recognition to recruit cellulosomes to the cell surface, a mechanism that maximises substrate access while facilitating complex assembly.

Roma-Rodrigues, C, Alves-Barroco C, Raposo {LR }, Costa {MN }, Fortunato E, Baptista {PMRV}, de Fernandes {MANCR}, Santos-Sanches I.  2016.  Infection of human keratinocytes by Streptococcus dysgalactiae subspecies dysgalactiae isolated from milk of the bovine udder, apr. Microbes And Infection. 18:290–293., Number 4: Elsevier Science B.V., Inc Abstract

Streptococcus dysgalactiae subsp. dysgalactiae (SDSD) are considered exclusive animal pathogens; however, a putative zoonotic upper limb cellulitis, a prosthetic joint infection and an infective endocarditis were described in humans. To unravel if bovine SDSD isolates are able to infect human cells, the adherence and internalization to human primary keratinocytes of two bovine SDSD strains isolated from milk collected from udder were analyzed. Bacterial adhesion assays and confocal microscopy indicate a high adherence and internalization of SDSD isolates to human cells, suggesting for the first time the ability of bovine isolates to infect human cells. (C) 2015 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

Vale, JR, Siopa F, Branco PS, Afonso CAM.  2016.  Ring Opening of 6-Azabicyclo{[}3.1.0]hex-3-en-2-ols in Water under Mild Conditions, APR. EUROPEAN JOURNAL OF ORGANIC CHEMISTRY. 2016:2048-2053., Number 11 Abstract
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Poggi, F, Firmino A, Amado M.  2016.  Reforço da eficiência energética à escala do município. Um processo em evolução, 31 May 2016. º Simpósio Lusófono, Cidades pra Nós – Envolver comunidades e cidadãos no desenvolvimento sustentável. , Lisboa: SBN 978-972-636-256-2
Aguirre, LE, de Oliveira A, Seč D, Čopar S, Almeida PL, Ravnik M, Godinho MH, Žumer S.  2016.  Sensing surface morphology of biofibers by decorating spider silk and cellulosic filaments with nematic microdroplets, 2016/02/02. Proceedings of the National Academy of Sciences. 113(5):1174. AbstractWebsite

Biological microfibers are remarkable materials with diverse structural and mechanical properties, such as high wear-resistance, elasticity, and biodegradability. However, with current techniques, there are few robust ways to sense the surface properties of the fibers, which crucially affect the organization of the fibers and their interactions with the surrounding material. In this paper, we show that surfaces of diverse biofibers, including spider silks and cellulosic fibers, can be easily sensed by depositing droplets of a nematic fluid onto the fibers. The droplets reveal the surface properties of the fibers via their optical images, notably showing also the fiber chirality. Further, the droplets are used to study the entanglement of biofibers, as a route toward novel biological and bioinspired materials.Probing the surface morphology of microthin fibers such as naturally occurring biofibers is essential for understanding their structural properties, biological function, and mechanical performance. The state-of-the-art methods for studying the surfaces of biofibers are atomic force microscopy imaging and scanning electron microscopy, which well characterize surface geometry of the fibers but provide little information on the local interaction potential of the fibers with the surrounding material. In contrast, complex nematic fluids respond very well to external fields and change their optical properties upon such stimuli. Here we demonstrate that liquid crystal droplets deposited on microthin biofibers—including spider silk and cellulosic fibers—reveal characteristics of the fibers’ surface, performing as simple but sensitive surface sensors. By combining experiments and numerical modeling, different types of fibers are identified through the fiber-to-nematic droplet interactions, including perpendicular and axial or helicoidal planar molecular alignment. Spider silks align nematic molecules parallel to fibers or perpendicular to them, whereas cellulose aligns the molecules unidirectionally or helicoidally along the fibers, indicating notably different surface interactions. The nematic droplets as sensors thus directly reveal chirality of cellulosic fibers. Different fiber entanglements can be identified by depositing droplets exactly at the fiber crossings. More generally, the presented method can be used as a simple but powerful approach for probing the surface properties of small-size bioobjects, opening a route to their precise characterization.

Gomis-Berenguer, A, Iniesta J, Moro A, Maurino V, Lima JC, Ania CO.  2016.  Boosting visible light conversion in the confined pore space of nanoporous carbons, 2016. Carbon. 96:98-104. AbstractWebsite
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Gomis-Berenguer, A, Iniesta J, Moro A, Maurino V, Lima JC, Ania CO.  2016.  Boosting visible light conversion in the confined pore space of nanoporous carbons (vol 96, pg 98, 2015), 2016. Carbon. 98:187-187. AbstractWebsite
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Melo, MJ, Araujo R, Castro R, Casanova C.  2016.  Colour degradation in medieval manuscripts, 2016. Microchemical Journal. 124:837-844. AbstractWebsite
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Alejo-Armijo, A, Salido S, Altarejos J, Parola AJ, Gago S, Basilio N, Cabrita L, Pina F.  2016.  Effect of Methyl, Hydroxyl, and Chloro Substituents in Position 3 of 3,4,7-Trihydroxyflavylium: Stability, Kinetics, and Thermodynamics, 2016. Chemistry-a European Journal. 22(35):12495-12505. AbstractWebsite
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Avo, J, Petrov V, Basilio N, Parola AJ, Pina F.  2016.  Evidence against the Twisted Intramolecular Charge Transfer (TICT) model in 7-aminoflavylium derivatives, 2016. Dyes and Pigments. 135:86-93. AbstractWebsite
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Granadeiro, CM, Ribeiro SO, Kaczmarek AM, Cunha-Silva L, Almeida PL, Gago S, Van Deun R, de Castro B, Balula SS.  2016.  A novel red emitting material based on polyoxometalate@periodic mesoporous organosilica, 2016. Microporous and Mesoporous Materials. 234:248-256. AbstractWebsite
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Ruivo, A, Ferro M, Andrade SM, Rocha J, Pina F, Laia CAT.  2016.  Photoluminescent Nanocrystals in a Multicomponent Aluminoborosilicate Glass, 2016. Journal of Physical Chemistry C. 120(43):24925-24931. AbstractWebsite
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Gomis-Berenguer, A, Seredych M, Iniesta J, Lima JC, Bandosz TJ, Ania CO.  2016.  Sulfur-mediated photochemical energy harvesting in nanoporous carbons, 2016. Carbon. 104:253-259. AbstractWebsite
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Basilio, N, Garnier T, Avo J, Danel M, Chassaing S, Pina F.  2016.  Synthesis and multistate characterization of bis-flavylium dications - symmetric resorcinol- and phloroglucinol-type derivatives as stochastic systems, 2016. Rsc Advances. 6(74):69698-69707. AbstractWebsite
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Barreira, CF, Melo MJ, Araujo R, Casanova C.  2016.  Through the eyes of science and art: a fourteenth-century winter breviary from Alcobaca scriptorium, 2016. Journal of Medieval Iberian Studies. 8(2):252-282. AbstractWebsite
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Aguilo, E, Gavara R, Baucells C, Guitart M, Lima JC, Llorca J, Rodriguez L.  2016.  Tuning supramolecular aurophilic structures: the effect of counterion, positive charge and solvent, 2016. Dalton Transactions. 45(17):7328-7339. AbstractWebsite
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Raposo, LR, Roma-Rodrigues C, Faísca P, Alves M, Henriques J, Carvalheiro MC, Corvo LM, Baptista PV, Pombeiro AJL, Fernandes AR.  2016.   Immortalization and characterization of a new canine mammary tumor cell line FR37-CMT. J. Veterinary and Comparative Oncology. AbstractWebsite

Here we describe the establishment of a new canine mammary tumour (CMT) cell line, FR37-CMT that does not show dependence on female hormonal signaling to induce tumour xenografts in NOD-SCID mice. FR37-CMT cell line has a stellate or fusiform shape, displays the ability to reorganize the collagen matrix, expresses vimentin, CD44 and shows the loss of E-cadherin which is considered a fundamental event in epithelial to mesenchymal transition (EMT). The up-regulation of ZEB1, the detection of phosphorylated ERK1/2 and the downregulation of DICER1 and miR-200c are also in accordance with the mesenchymal characteristics of FR37-CMT cell line. FR37-CMT shows a higher resistance to cisplatin (IC50>50 µM) and to doxorubicin (IC50>5.3 µM) compared with other CMT cell lines. These results support the use of FR37-CMT as a new CMT model that may assist the understanding of the molecular mechanisms underlying EMT, CMT drug resistance, fostering the development of novel therapies targeting CMT.

Fortunato, Gaspar, Diana, Duarte, Candido, Pereira, Águas, Hugo, Vicente, António, Dourado, Fernando, Gama, F. M., Martins R.  2016.  Chapter 11 - Optoelectronic Devices from Bacterial NanoCellulose. Bacterial Nanocellulose. :19pp..: Elsevier Inc.
Mendes, MJ, Araújo A, Vicente A, Águas H, Ferreira I, Fortunato E, Martins R.  2016.  Design of optimized wave-optical spheroidal nanostructures for photonic-enhanced solar cells. Nano Energy. 26:286-296. AbstractWebsite

The interaction of light with wavelength-sized photonic nanostructures is highly promising for light management applied to thin-film photovoltaics. Several light trapping effects come into play in the wave optics regime of such structures that crucially depend on the parameters of the photonic and absorbing elements. Thus, multi-parameter optimizations employing exact numerical models, as performed in this work, are essential to determine the maximum photocurrent enhancement that can be produced in solar cells.

Generalized spheroidal geometries and high-index dielectric materials are considered here to model the design of the optical elements providing broadband absorption enhancement in planar silicon solar cells. The physical mechanisms responsible for such enhancement are schematized in a spectral diagram, providing a deeper understanding of the advantageous characteristics of the optimized geometries. The best structures, composed of TiO2 half-spheroids patterned on the cells' top surface, yield two times higher photocurrent (up to 32.5 mA/cm2 in 1.5 µm thick silicon layer) than the same devices without photonic schemes.

These results set the state-of-the-art closer to the theoretical Lambertian limit. In addition, the considered light trapping designs are not affected by the traditional compromise between absorption enhancement versus current degradation by recombination, which is a key technological advantage.

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