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2001
Pauleta, SR, Lu Y, Goodhew CF, Moura I, Pettigrew GW, Shelnutt JA.  2001.  Calcium-dependent conformation of a heme and fingerprint peptide of the diheme cytochrome c peroxidase from Paracoccus pantotrophus, Jun 5. Biochemistry. 40:6570-6579., Number 22 AbstractWebsite

The structural changes in the heme macrocycle and substituents caused by binding of Ca2+ to the diheme cytochrome c peroxidase from Paracoccus pantotrophus were clarified by resonance Raman spectroscopy of the inactive fully oxidized form of the enzyme. The changes in the macrocycle vibrational modes are consistent with a Ca2+-dependent increase in the out-of-plane distortion of the low-potential heme, the proposed peroxidatic heme. Most of the increase in out-of-plane distortion occurs when the high-affinity site I is occupied, but a small further increase in distortion occurs when site II is also occupied by Ca2+ or Mg2+. This increase in the heme distortion explains the red shift in the Soret absorption band that occurs upon Ca2+ binding. Changes also occur in the low-frequency substituent modes of the heme, indicating that a structural change in the covalently attached fingerprint pentapeptide of the LP heme occurs upon Ca2+ binding to site I. These structural changes may lead to loss of the sixth ligand at the peroxidatic heme in the semireduced form of the enzyme and activation.

Timóteo, CG, Tavares P, Pettigrew GW, Moura I.  2001.  Calcium in bacterial peroxidases - Pseudomonas stutzeri cytochrome c peroxidase, Aug. Journal Of Inorganic Biochemistry. {86}:{456}., Number {1} Abstract
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Di Rocco, G, Pereira AS, Bursakov SA, Gavel OY, Rusnak F, Lampreia J, Moura JJG, Moura I.  2001.  Cloning of a novel Mo-Cu containing protein from Desulfovibrio.gigas, Aug. Journal Of Inorganic Biochemistry. {86}:{202}., Number {1}, 655 AVENUE OF THE AMERICAS, NEW YORK, NY 10010 USA: ELSEVIER SCIENCE INC Abstract
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Borges, JP, Godinho MH, Martins AF, Trindade AC, Belgacem MN.  2001.  Cellulose-based composite films. Mechanics of composite materials. 37(3):257–264., Number 3: Springer AbstractWebsite

The mechanical and optical properties of cellulose-based composite films are investigated.It is shown that the use of toluene diisocyanate as a coupling agent and Avicel fibers as reinforcing elements give films with the highest mechanical characteristics. Using differential scanning calorimetry, it is also found that the glass transition temperature Tg of all the materials studied is below the room temperature and that the Tg increased with cross-linking and introduction of Avicel.

Amado, M.  2001.  Conservação Energética em Edifícios de Habitação. 6ª Conferência Nacional sobre a Qualidade do Ambiente. :846-848., Lisbon
Moniz, A.  2001.  A coopera{\c c}ão entre equipas de trabalho em empresas em rede: vantagens para o desenvolvimento regional[Workteam Co-operation in Networked Companies: regional development advantages]. , Number 5920: University Library of Munich, Germany Abstract

Working teams in enterprise environment are considered as the most advanced forms of work organisation. This means the forms that can improve productivity quality of working life. Nevertheless, it prevails a slow development and dissemination of these advanced organisational forms in European companies. The reason for that lays in a complex linkage factors from social values to the economical pressures. But other factors are also related to the national systems of education training, to the different systems of industrial relations and technology policy.

Bazzicalupi, C, Bencini A, Berni E, Bianchi A, Giorgi C, Fusi V, Valtancoli B, Lodeiro C, Roque A, Pina F.  2001.  Coordination properties of a polyamine cryptand with two different binding moieties. A case of a pH-modulated antenna device based on a new Eu(III) cryptate complex. Inorganic Chemistry. 40:6172-6179., Number 24 AbstractWebsite
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2000
Dias, JM, Cunha CA, Teixeira S, Almeida G, Costa C, Lampreia J, Moura JJ, Moura I, Romao MJ.  2000.  Crystallization and preliminary X-ray analysis of a membrane-bound nitrite reductase from Desulfovibrio desulfuricans ATCC 27774, Feb. Acta Crystallogr D Biol Crystallogr. 56:215-7., Number Pt 2 AbstractWebsite

Nitrite reductase from the sulfate-reducing bacterium Desulfovibrio desulfuricans ATCC 27774 is a multihaem (type c) membrane-bound enzyme that catalyzes the dissimilatory conversion of nitrite to ammonia. Crystals of the oxidized form of this enzyme were obtained using PEG and CaCl(2) as precipitants in the presence of 3--(decylmethylammonium)propane-1-sulfonate and belong to the space group P2(1)2(1)2(1), with unit-cell parameters a = 78.94, b = 104.59, c = 143.18 A. A complete data set to 2.30 A resolution was collected using synchrotron radiation at the ESRF. However, the crystals may diffract to beyond 1.7 A and high-resolution data will be collected in the near future.

Moniz, A, Kovács I.  2000.  Conditions Of Inter-Firm Co-Operation In A Virtual Enterprise Concept : The Case Of Automotive Sector In Portugal. , Number 5658: University Library of Munich, Germany Abstract

One can assist to significant changes in the organisation of manufacturing systems during the last years. Lean production, network enterprise or the virtual enterprises are reference concepts of the re-organisation of manufacturing systems. Some authors mention a new enterprise paradigm, of generalisation of intelligent manufacture, organised in networks and assisted by information and communication technologies. The first part of the paper develops a critical approach to the illusion connected to these concepts, calling the attention to the diversity of the type of relationships among firms. If virtual enterprises (VE) are networks of firms with intensive usage of ICT, one can verify a predominance of a technicist perspective. This one considers that the development of VEs is a technological problem, of development and management of information systems, and of entrepreneurial share of different databases. Sociology can be useful, even fundamental in an anthropocentric approach. The last part of the paper is on the Portuguese situation in the automobile sector, approaching the types of entrepreneurial organisation.

Dias, JM, Cunha CA, Teixeira S, Almeida G, Costa C, Lampreia J, Moura JJG, Moura I, Romao MJ.  2000.  Crystallization and preliminary X-ray analysis of a membrane-bound nitrite reductase from Desulfovibrio desulfuricans ATCC 27774. Acta Crystallographica Section D-Biological Crystallography. 56:215-217. AbstractWebsite
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1999
Alves, T, Besson S, Duarte LC, Pettigrew GW, Girio FMF, Devreese B, Vandenberghe I, Van Beeumen J, Fauque G, Moura I.  1999.  A cytochrome c peroxidase from Pseudomonas nautica 617 active at high ionic strength: expression, purification and characterization, Oct 12. Biochimica Et Biophysica Acta-Protein Structure and Molecular Enzymology. 1434:248-259., Number 2 AbstractWebsite

Cytochrome c peroxidase was expressed in cells of Pseudomonas nautica strain 617 grown under microaerophilic conditions. The 36.5 kDa dihaemic enzyme was purified to electrophoretic homogeneity in three chromatographic steps. N-terminal sequence comparison showed that the Ps. nautica enzyme exhibits a high similarity with the corresponding proteins from Paracoccus denitrificans and Pseudomonas aeruginosa. UV-visible spectra confirm calcium activation of the enzyme through spin state transition of the peroxidatic haem. Monohaemic cytochrome c(552) from Ps. nautica was identified as the physiological electron donor, with a half-saturating concentration of 122 mu M and allowing a maximal catalytic centre activity of 116 000 min(-1). Using this cytochrome the enzyme retained the same activity even at high ionic strength. There are indications that the interactions between the two redox partners are mainly hydrophobic in nature. (C) 1999 Elsevier Science B.V. All rights reserved.

Correia, C, Monzani E, Moura I, Lampreia J, Moura JJ.  1999.  Cross-linking between cytochrome c3 and flavodoxin from Desulfovibrio gigas, Mar 16. Biochem Biophys Res Commun. 256:367-71., Number 2 AbstractWebsite

Tetraheme cytochrome c3 (13 kDa) and flavodoxin (16 kDa), are small electron transfer proteins that have been used to mimic, in vitro, part of the electron-transfer chain that operates between substract electron donors and respiratory electron acceptors partners in Desulfovibrio species (Palma, N., Moura, I., LeGall, J., Van Beeumen, J., Wampler, J., Moura, J. J. G. (1994) Biochemistry 33, 6394-6407). The electron transfer between these two proteins is believed to occur through the formation of a specific complex where electrostatic interaction is the main driving force (Stewart, D., LeGall, J., Moura, I., Moura, J.J.G., Peck, H.D., Xavier, A.V., Weiner, P.K. and Wampler, J.E. (1988) Biochemistry 27, 2444-2450, Stewart, D., LeGall, J., Moura, I., Moura, J.J.G., Peck, H.D., Xavier, A.V., Weiner, P., Wampler, J. (1989) Eur. J. Biochem. 185, 695-700). In order to obtain structural information of the pre-complex, a covalent complex between the two proteins was prepared. A water-soluble carbodiimide [EDC (1-ethyl-3(3 dimethylaminopropyl) carbodiimide hydrochloride] was used for the cross linking reaction. The reaction was optimized varying a wide number of experimental parameters such as ionic strength, protein and cross linker concentration, and utilization of different cross linkers and reaction time between the crosslinker and proteins.

Dias, JM, Than ME, Humm A, Huber R, Bourenkov GP, Bartunik HD, Bursakov S, Calvete J, Caldeira J, Carneiro C, Moura JJ, Moura I, Romao MJ.  1999.  Crystal structure of the first dissimilatory nitrate reductase at 1.9 A solved by MAD methods, Jan 15. Structure. 7:65-79., Number 1 AbstractWebsite

BACKGROUND: The periplasmic nitrate reductase (NAP) from the sulphate reducing bacterium Desulfovibrio desulfuricans ATCC 27774 is induced by growth on nitrate and catalyses the reduction of nitrate to nitrite for respiration. NAP is a molybdenum-containing enzyme with one bis-molybdopterin guanine dinucleotide (MGD) cofactor and one [4Fe-4S] cluster in a single polypeptide chain of 723 amino acid residues. To date, there is no crystal structure of a nitrate reductase. RESULTS: The first crystal structure of a dissimilatory (respiratory) nitrate reductase was determined at 1.9 A resolution by multiwavelength anomalous diffraction (MAD) methods. The structure is folded into four domains with an alpha/beta-type topology and all four domains are involved in cofactor binding. The [4Fe-4S] centre is located near the periphery of the molecule, whereas the MGD cofactor extends across the interior of the molecule interacting with residues from all four domains. The molybdenum atom is located at the bottom of a 15 A deep crevice, and is positioned 12 A from the [4Fe-4S] cluster. The structure of NAP reveals the details of the catalytic molybdenum site, which is coordinated to two MGD cofactors, Cys140, and a water/hydroxo ligand. A facile electron-transfer pathway through bonds connects the molybdenum and the [4Fe-4S] cluster. CONCLUSIONS: The polypeptide fold of NAP and the arrangement of the cofactors is related to that of Escherichia coli formate dehydrogenase (FDH) and distantly resembles dimethylsulphoxide reductase. The close structural homology of NAP and FDH shows how small changes in the vicinity of the molybdenum catalytic site are sufficient for the substrate specificity.

Dias, JM, Bursakov S, Carneiro C, Moura JJ, Moura I, Romao MJ.  1999.  Crystallization and preliminary x-ray analysis of a nitrate reductase from Desulfovibrio desulfuricans ATCC 27774, Apr. Acta Crystallogr D Biol Crystallogr. 55:877-9., Number Pt 4 AbstractWebsite

Periplasmic nitrate reductase from the sulfate-reducing bacterium Desulfovibrio desulfuricans ATCC 27774 contains two molybdopterin guanine dinucleotide cofactors and one [4Fe-4S] cluster as prosthetic groups and catalyzes the conversion of nitrate to nitrite. Crystals of the oxidized form of this enzyme were obtained using PEG as precipitant and belong to space group P3121 or P3221, with unit-cell dimensions a = b = 106.3, c = 135.1 A. There is one monomer of 80 kDa in the asymmetric unit, which corresponds to a Matthews ratio of 2.75 A3 Da-1. Using cryo-cooling procedures and X-rays from a rotating-anode generator, diffraction was observed to beyond 3.0 A resolution.

Pina, F, Melo MJ, Bernardo MA, Luis SV, Garcia-Espana E.  1999.  Chemosensors displaying pH controlled multistage fluorescence emission. Journal of Photochemistry and Photobiology a-Chemistry. 126:65-69., Number 1-3 AbstractWebsite
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Pamplona, A, Pereira AS, Tavares P, Moura I, Rusnak F, Moura JJG.  1999.  Cloning and overexpression of E.Coli fuscoredoxin. Journal Of Inorganic Biochemistry. {74}:{260}., Number {1-4} Abstract
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Prudencio, M, Pereira AS, Tavares P, Besson S, Moura I.  1999.  Copper-containing nitrous oxide reductase from Pseudomonas nautica: spectroscopic and redox properties. Journal Of Inorganic Biochemistry. {74}:{267}., Number {1-4} Abstract
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Bursakov, SA, Brondino C, Dias JM, Carneiro C, Caldeira J, Duarte RO, Romao MJ, Moura I, Moura JJG.  1999.  Cross immunological reactions and spectroscopy study within nitrate reductase and other mononuclear Mo containing enzymes of the sulfate reducing bacteria. Journal of Inorganic Biochemistry. 74:86-86., Number 1-4 AbstractWebsite
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Dias, JM, Than ME, Humm A, Huber R, Bourenkov GP, Bartunik HD, Bursakov S, Calvete J, Caldeira J, Carneiro C, Moura JJG, Moura I, Romao MJ.  1999.  Crystal structure of the first dissimilatory nitrate reductase at 1.9 angstrom solved by MAD methods. Structure with Folding & Design. 7:65-79., Number 1 AbstractWebsite
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Dias, JM, Bursakov S, Carneiro C, Moura JJG, Moura I, Romao MJ.  1999.  Crystallization and preliminary X-ray analysis of a nitrate reductase from Desulfovibrio desulfuricans ATCC 27774. Acta Crystallographica Section D-Biological Crystallography. 55:877-879. AbstractWebsite
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Dias, JM, Than ME, Huber R, Bourenkov GP, Bartunik HD, Bursakov S, Moura JJG, Moura I, Romao MJ.  1999.  Crystallographic studies of a dissimilatory nitrate reductase and mechanistic implications. Journal of Inorganic Biochemistry. 74:113-113., Number 1-4 AbstractWebsite
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