Velasco, LF, Lima JC, Ania C.
2014.
Visible-Light Photochemical Activity of Nanoporous Carbons under Monochromatic Light. Angewandte Chemie International Edition. 53:1-4.
AbstractBy using monochromatic light the ability of semiconductor-free nanoporous carbons to convert the low-energy photons from the visible spectrum into chemical reactions (i.e. phenol photooxidation) is demonstrated. Data shows that the onset wavelength of the photochemical activity can be tuned by surface functionalization, with enhanced visible-light conversion upon introducing N-containing groups.
McVey, CE, Ferreira MJ, Correia B, Lahiri S, de Sanctis D, Carrondo MA, Lindley PF, de Sá Nogueira I, Soares CM, Bento I.
2014.
The importance of the Abn2 calcium cluster in the endo-1,5-arabinanase activity from Bacillus subtilis. JBIC Journal of Biological Inorganic Chemistry. 19:505-513., Number 4-5: Springer Berlin Heidelberg
AbstractArabinanase is a glycosyl hydrolase that is able to cleave the glycosidic bonds of α-1,5-L-arabinan, releasing arabino-oligosaccharides and L-arabinose. The enzyme has two domains, an N-terminal catalytic domain with a characteristic β-propeller fold and a C-terminal domain whose function is unknown. A calcium ion, located near the catalytic site, serves to stabilize the N-terminal domain, but it has also been proposed to play a key role in the enzyme mechanism. The present work describes the structure of an inactive mutant of the wild-type enzyme (H318Q) and in which the calcium ion has been adventitiously replaced by nickel. These structural studies, together with functional and modelling studies, clearly support the role of the calcium ion in the overall reaction mechanism.
Sampaio, JM, Madeira TI, Marques JP, Parente F, Costa AM, Indelicato P, Santos JP, Lépy M-C, Ménesguen Y.
2014.
Approaches for theoretical and experimental determinations of K-shell decay rates and fluorescence yields in Ge. Physical Review A. 89:012512., Number 1: APS
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Barreira, G, Ferreira ASD, Vidinha P, Cabral JMS, Martinho JMG, Lima JC, Cabrita EJ, Barreiros S.
2014.
Assessing diffusion in enzyme loaded sol–gel matrices. RSC Advances. 4:25099-25105.
AbstractPulsed field gradient spin echo high resolution magic angle spinning nuclear magnetic resonance spectroscopy is a powerful technique to characterize confined biosystems. We used this approach to assess the diffusion of solvent and reaction species within sol–gel matrices differing in enzyme loading.
Moro, AJ, Pana A-M, Cseh L, Costisor O, Parola J, Cunha-Silva L, Puttreddy R, Rissanen K, Pina F.
2014.
Chemistry and Photochemistry of 2,6-Bis(2-hydroxybenzilidene)cyclohexanone. An Example of a Compound Following the Anthocyanins Network of Chemical Reactions. Journal of Physical Chemistry A. 118:6208-6215., Number 32
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F. S. Silva, T, M. D. R. S. Martins L, Guedes da Silva FMC, Kuznetsov ML, Fernandes AR, Silva A, Pan C-J, Lee J-F, Hwang B-J, J. L. Pombeiro A.
2014.
Cobalt Complexes with Pyrazole Ligands as Catalyst Precursors for the Peroxidative Oxidation of Cyclohexane: X-ray Absorption Spectroscopy Studies and Biological Applications. Chemistry – An Asian Journal. 9:1132–1143., Number 4: WILEY-VCH Verlag
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Reimão-Pinto, {MM }, Cordeiro A, Almeida C, Pinheiro {AV }, Moro A, Lima {JC }, Baptista P.
2014.
Dual-color control of nucleotide polymerization sensed by a fluorescence actuator. Photochemical & Photobiological Sciences. 13:751–756., Number 5: Springer
AbstractSpatial and temporal control of molecular mechanisms can be achieved using photolabile bonds that connect biomolecules to protective caging groups, which can be cleaved upon irradiation of a specific wavelength, releasing the biomolecule ready-to-use. Here we apply and improve a previously reported strategy to tightly control in vitro transcription reactions. The strategy involves two caging molecules that block both ATP and GTP nucleotides. Additionally, we designed a molecular beacon complementary to the synthesized mRNA to infer its presence through a light signal. Upon release of both nucleotides through a specific monochromatic light (390 and 325 nm) we attain a light signal indicative of a successful in vitro transcription reaction. Similarly, in the absence of irradiation, no intense fluorescence signal was obtained. We believe this strategy could further be applied to DNA synthesis or the development of logic gates.