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2014
Schedel, J, Amado MP.  2014.  Urban Regeneration: More Energy, Less Carbon. 40th IAHS World Congress in Housing – Sustainable Housing Construction. :49,ISBN:978-989-98949-0-7., Funchal, Madeira: Univ. Coimbra
Ribeiro D, Kulakova A, Quaresma P, Pereira E, Bonifácio C, Romão MJ, Franco R, Carvalho AL.  2014.  THE USE OF GOLD NANOPARTICLES AS ADDITIVES IN PROTEIN CRYSTALLIZATION. Cryst. Growth Des. 14:222-227.
Velasco, LF, Lima JC, Ania C.  2014.  Visible-Light Photochemical Activity of Nanoporous Carbons under Monochromatic Light. Angewandte Chemie International Edition. 53:1-4. Abstract

By using monochromatic light the ability of semiconductor-free nanoporous carbons to convert the low-energy photons from the visible spectrum into chemical reactions (i.e. phenol photooxidation) is demonstrated. Data shows that the onset wavelength of the photochemical activity can be tuned by surface functionalization, with enhanced visible-light conversion upon introducing N-containing groups.

Sanguino P, Monteiro T, Bhattacharyya SR, Dias CJ, Igreja R, Franco R.  2014.  ZnO NANORODS AS IMMOBILIZATION LAYERS FOR INTERDIGITATED CAPACITIVE IMMUNOSENSORS. Sensors and Actuators B:Chemical . 204:211-217.
Baptista, {PMRV}.  2014.  3h Gold nanobeacons: a potential nanotheranostics platform. Nanomedicine. 9:2247–2250., Number 15: Future Medicine Ltd. Abstract
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Gavara, R, Gago S, Jordao N, Pina F.  2014.  4 '-Carboxy-7-hydroxyflavylium. A Multistate System Involving Twelve Species Reversibly lnterconverted by pH and Light Stimuli. Journal of Physical Chemistry A. 118:4723-4731., Number 26 AbstractWebsite
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McVey, CE, Ferreira MJ, Correia B, Lahiri S, de Sanctis D, Carrondo MA, Lindley PF, de Sá Nogueira I, Soares CM, Bento I.  2014.  The importance of the Abn2 calcium cluster in the endo-1,5-arabinanase activity from Bacillus subtilis. JBIC Journal of Biological Inorganic Chemistry. 19:505-513., Number 4-5: Springer Berlin Heidelberg Abstract

Arabinanase is a glycosyl hydrolase that is able to cleave the glycosidic bonds of α-1,5-L-arabinan, releasing arabino-oligosaccharides and L-arabinose. The enzyme has two domains, an N-terminal catalytic domain with a characteristic β-propeller fold and a C-terminal domain whose function is unknown. A calcium ion, located near the catalytic site, serves to stabilize the N-terminal domain, but it has also been proposed to play a key role in the enzyme mechanism. The present work describes the structure of an inactive mutant of the wild-type enzyme (H318Q) and in which the calcium ion has been adventitiously replaced by nickel. These structural studies, together with functional and modelling studies, clearly support the role of the calcium ion in the overall reaction mechanism.

Miguel, C, Pinto JV, Clarke M, Melo MJ.  2014.  The alchemy of red mercury sulphide: The production of vermilion for medieval art. Dyes and Pigments. 102:210-217. AbstractWebsite
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Ferraz, R, Teixeira V, Rodrigues D, Fernandes R, Prudencio C, Noronha JP, Petrovski Z, Branco LC.  2014.  Antibacterial activity of Ionic Liquids based on ampicillin against resistant bacteria. Rsc Advances. 4:4301-4307., Number 9 AbstractWebsite
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Sampaio, JM, Madeira TI, Marques JP, Parente F, Costa AM, Indelicato P, Santos JP, Lépy M-C, Ménesguen Y.  2014.  Approaches for theoretical and experimental determinations of K-shell decay rates and fluorescence yields in Ge. Physical Review A. 89:012512., Number 1: APS AbstractWebsite
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Viegas, MC, Moniz A, Santos PT.  2014.  Artisanal fishermen contribution for the integrated and sustainable coastal management - application of strategic SWOT analysis. Procedia - Social and Behavioral Sciences. 2014:257-267. AbstractWebsite
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Barreira, G, Ferreira ASD, Vidinha P, Cabral JMS, Martinho JMG, Lima JC, Cabrita EJ, Barreiros S.  2014.  Assessing diffusion in enzyme loaded sol-gel matrices. Rsc Advances. 4:25099-25105., Number 48 AbstractWebsite
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Barreira, G, Ferreira ASD, Vidinha P, Cabral JMS, Martinho JMG, Lima JC, Cabrita EJ, Barreiros S.  2014.  Assessing diffusion in enzyme loaded sol–gel matrices. RSC Advances. 4:25099-25105. Abstract

Pulsed field gradient spin echo high resolution magic angle spinning nuclear magnetic resonance spectroscopy is a powerful technique to characterize confined biosystems. We used this approach to assess the diffusion of solvent and reaction species within sol–gel matrices differing in enzyme loading.

Kuckova, SH, Krizkova MC, Cortes Pereira CL, Hynek R, Lavrova O, Busani T, Branco LC, Anca Sandu IC.  2014.  Assessment of Green Cleaning Effectiveness on Polychrome Surfaces by MALDI-TOF Mass Spectrometry and Microscopic Imaging. Microscopy Research and Technique. 77:574-585., Number 8 AbstractWebsite
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Otrelo-Cardoso, AR, Schwuchow V, Rodrigues D, Cabrita EJ, Leimkuehler S, Romao MJ, Santos-Silva T.  2014.  Biochemical, Stabilization and Crystallization Studies on a Molecular Chaperone (PaoD) Involved in the Maturation of Molybdoenzymes. Plos One. 9, Number 1 AbstractWebsite
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Otero, V, Sanches D, Montagner C, Vilarigues M, Carlyle L, Lopes JA, Melo MJ.  2014.  Characterisation of metal carboxylates by Raman and infrared spectroscopy in works of art. Journal of Raman Spectroscopy. 45:1197-1206., Number 11-12 AbstractWebsite
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Pina, F.  2014.  Chemical Applications of Anthocyanins and Related Compounds. A Source of Bioinspiration. Journal of Agricultural and Food Chemistry. 62:6885-6897., Number 29 AbstractWebsite
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Moro, AJ, Pana A-M, Cseh L, Costisor O, Parola J, Cunha-Silva L, Puttreddy R, Rissanen K, Pina F.  2014.  Chemistry and Photochemistry of 2,6-Bis(2-hydroxybenzilidene)cyclohexanone. An Example of a Compound Following the Anthocyanins Network of Chemical Reactions. Journal of Physical Chemistry A. 118:6208-6215., Number 32 AbstractWebsite
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F. S. Silva, T, M. D. R. S. Martins L, Guedes da Silva FMC, Kuznetsov ML, Fernandes AR, Silva A, Pan C-J, Lee J-F, Hwang B-J, J. L. Pombeiro A.  2014.  Cobalt Complexes with Pyrazole Ligands as Catalyst Precursors for the Peroxidative Oxidation of Cyclohexane: X-ray Absorption Spectroscopy Studies and Biological Applications. Chemistry – An Asian Journal. 9:1132–1143., Number 4: WILEY-VCH Verlag AbstractWebsite
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Sousa, A, Cabrita L, Araujo P, Mateus N, Pina F, de Freitas V.  2014.  Color stability and spectroscopic properties of deoxyvitisins in aqueous solution. New Journal of Chemistry. 38:539-544., Number 2 AbstractWebsite
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Sousa, A, Cabrita L, Araujo P, Mateus N, Pina F, de Freitas V.  2014.  Color stability and spectroscopic properties of deoxyvitisins in aqueous solution. New Journal of Chemistry. 38:539-544., Number 2 AbstractWebsite
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Avo, J, Cunha-Silva L, Lima JC, Jorge Parola A.  2014.  Design and Synthesis of Photoactive Ionic Liquids. Organic Letters. 16:2582-2585., Number 10 AbstractWebsite
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Reimão-Pinto, {MM }, Cordeiro A, Almeida C, Pinheiro {AV }, Moro A, Lima {JC }, Baptista P.  2014.  Dual-color control of nucleotide polymerization sensed by a fluorescence actuator. Photochemical & Photobiological Sciences. 13:751–756., Number 5: Springer Abstract

Spatial and temporal control of molecular mechanisms can be achieved using photolabile bonds that connect biomolecules to protective caging groups, which can be cleaved upon irradiation of a specific wavelength, releasing the biomolecule ready-to-use. Here we apply and improve a previously reported strategy to tightly control in vitro transcription reactions. The strategy involves two caging molecules that block both ATP and GTP nucleotides. Additionally, we designed a molecular beacon complementary to the synthesized mRNA to infer its presence through a light signal. Upon release of both nucleotides through a specific monochromatic light (390 and 325 nm) we attain a light signal indicative of a successful in vitro transcription reaction. Similarly, in the absence of irradiation, no intense fluorescence signal was obtained. We believe this strategy could further be applied to DNA synthesis or the development of logic gates.