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2005
Ortigueira, M.  2005.  Processamento Digital de Sinais, September. Edição do Serviço de Educação e Bolsas da Fundação Calouste Gulbenkian. : Fundação Calouste Gulbenkian AbstractWebsite
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Urze, P, Barroso S, Moniz AB.  2005.  Practices and trends of telework in the Portuguese industry: the results of surveys in the textile, metal and software sectors, November. Enterprise and Work Innovation Studies. 1:93-108., Number 1 AbstractWebsite

The aim of the TeleRisk Project on labour relations and professional risks within the context of teleworking in Portugal – supported by IDICT – Institute for Development and Inspection of Working Conditions (Ministry of Labour), is to study the practices and forms of teleworking in the manufacturing sectors in Portugal. The project chose also the software industry as a reference sector, even though it does not intend to exclude from the study any other sector of activity or the so-called “hybrid” forms of work. However, the latter must have some of the characteristics of telework. The project thus takes into account the so-called “traditional” sectors of activity, namely textile and machinery and metal engineering (machinery and equipment), not usually associated to this type of work. However, telework could include, in the so-called “traditional” sectors, other variations that are not found in technologically based sectors. One of the evaluation methods for the dynamics associated to telework consisted in carrying out surveys by means of questionnaires, aimed at employers in the sectors analysed. This paper presents some of the results of those surveys. It is important to mention that, being a preliminary analysis, it means that it does not pretend to have exhausted all the issues in the survey, but has meant that it shows the bigger tendencies, in terms of teleworking practices, of the Portuguese industry.

Baptista, {PMRV}.  2005.  Principles in genetic risk assessment., jan. Ther Clin Risk Manag. 1:15–20., Number 1 Abstract
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Gonçalves, LL, Almeida MG, Lampreia J, Moura JJG, Moura I.  2005.  Prediction of Signal Peptides and Signal Anchors of Cytocrome c Nitrite Reductase from Desulfovibrio desulfuricans ATCC 27774 Using Bioinformatic Tools. Essays in Bioinformatics. Vol. 368(D.S. Moss, S. Jelaska, S. Pongor, Ed.).:203-208.: IOS Press (Amsterdam) Abstract

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Palma, LB, Coito FV, da Silva RN.  2005.  Process fault diagnosis approach based on neural observers. Emerging Technologies and Factory Automation, 2005. ETFA 2005. 10th IEEE Conference on. 1:4–pp.: IEEE. Abstract

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Palma, LB, Coito FV, da Silva RN.  2005.  Process fault diagnosis approach based on neural observers. Emerging Technologies and Factory Automation, 2005. ETFA 2005. 10th IEEE Conference on. 1:4–pp.: IEEE Abstract

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Lopez-Cortes, A, Bursakov S, Figueiredo A, Thapper AE, Todorovic S, Moura JJ, Ollivier B, Moura I, Fauque G.  2005.  Purification and preliminary characterization of tetraheme cytochrome c3 and adenylylsulfate reductase from the peptidolytic sulfate-reducing bacterium Desulfovibrio aminophilus DSM 12254. Bioinorg Chem Appl. :81-91. AbstractWebsite

Two proteins were purified and preliminarily characterized from the soluble extract of cells (310 g, wet weight) of the aminolytic and peptidolytic sulfate-reducing bacterium Desulfovibrio (D.) aminophilus DSM 12254. The iron-sulfur flavoenzyme adenylylsulfate (adenosine 5'-phosphosulfate, APS) reductase, a key enzyme in the microbial dissimilatory sulfate reduction, has been purified in three chromatographic steps (DEAE-Biogel A, Source 15, and Superdex 200 columns). It contains two different subunits with molecular masses of 75 and 18 kDa. The fraction after the last purification step had a purity index (A(278nm) / A(388nm)) of 5.34, which was used for further EPR spectroscopic studies. The D. aminophilus APS reductase is very similar to the homologous enzymes isolated from D. gigas and D. desulfuricans ATCC 27774. A tetraheme cytochrome c(3) (His-heme iron-His) has been purified in three chromatographic steps (DEAE- Biogel A, Source 15, and Biogel-HTP columns) and preliminarily characterized. It has a purity index ([A(553nm) - A(570nm)](red) / A(280nm)) of 2.9 and a molecular mass of around 15 kDa, and its spectroscopic characterization (NMR and EPR) has been carried out. This hemoprotein presents similarities with the tetraheme cytochrome c(3) from Desulfomicrobium (Des.) norvegicum (NMR spectra, and N-terminal amino acid sequence).

2004
Pauleta, SR, Guerlesquin F, Goodhew CF, Devreese B, Van Beeumen J, Pereira AS, Moura I, Pettigrew GW.  2004.  Paracoccus pantotrophus pseudoazurin is an electron donor to cytochrome c peroxidase, Sep 7. Biochemistry. 43:11214-11225., Number 35 AbstractWebsite

The gene for pseudoazurin was isolated from Paracoccus pantotrophus LMD 52.44 and expressed in a heterologous system with a yield of 54.3 mg of pure protein per liter of culture. The gene and protein were shown to be identical to those from P. pantotrophus LMD 82.5. The extinction coefficient of the protein was re-evaluated and was found to be 3.00 mM(-1) cm(-1) at 590 nm. It was confirmed that the oxidized protein is in a weak monomer/dimer equilibrium that is ionic- strength-dependent. The pseudoazurin was shown to be a highly active electron donor to cytochrome c peroxidase, and activity showed an ionic strength dependence consistent with an electrostatic interaction. The pseudoazurin has a very large dipole moment, the vector of which is positioned at the putative electron-transfer site, His81, and is conserved in this position across a wide range of blue copper proteins. Binding of the peroxidase to pseudoazurin causes perturbation of a set of NMR resonances associated with residues on the His81 face, including a ring of lysine residues. These lysines are associated with acidic residues just back from the rim, the resonances of which are also affected by binding to the peroxidase. We propose that these acidic residues moderate the electrostatic influence of the lysines and so ensure that specific charge interactions do not form across the interface with the peroxidase.

Bazzicalupi, C, Bencini A, Berni E, Bianchi A, Borsari L, Giorgi C, Valtancoli B, Lodeiro C, Lima JC, Parola AJ, Pina F.  2004.  Protonation and coordination properties towards Zn(II), Cd(II) and Hg(II) of a phenanthroline-containing macrocycle with an ethylamino pendant arm, 2004. Dalton Transactions. :591-597. AbstractWebsite

Protonation and Zn(II), Cd(II) and Hg(II) coordination with the ligand 5-aminoethyl-2,5,8-triaza-[9]-10,23-phenanthrolinophane (L2), which contains an aminoethyl pendant attached to a phenanthroline-containing macrocycle, have been investigated by means of potentiometric, H-1 NMR and spectrofluorimetric titrations in aqueous solutions. The coordination properties of L2 are compared with those of the ligand 2,5,8-triaza-[9]-10,23-phenanthrolinophane (L1). Ligand protonation occurs on the aliphatic amine groups and does not involve directly the heteroaromatic nitrogens. The fluorescence emission properties of L2 are controlled by the protonation state of the benzylic nitrogens: when not protonated, their lone pairs are available for an electron transfer process to the excited phenanthroline, quenching the emission. As a consequence, the ligand is emissive only in the highly charged [H(3)L2](3+) and [H(4)L2](4+) species, where the benzylic nitrogens are protonated. Considering metal complexation, both [ML1](2+) and [ML2](2+) complexes (M=Zn(II) and Cd(II)) are not emissive, since the benzylic nitrogens are weakly involved in metal coordination, and, once again, they are available for quenching the fluorescence emission. Protonation of the L2 complexes to give [MHL2](3+) species, instead, leads to a recovery of the fluorescence emission. Complex protonation, in fact, occurs on the ethylamino group and gives a marked change of the coordination sphere of the metals, with a stronger involvement in metal coordination of the benzylic nitrogens; consequently, their lone pairs are not available for the process of emission quenching.

Pauleta, SR, Guerlesquin F, Goodhew CF, Devreese B, Van Beeumen J, Pereira AS, Moura I, Pettigrew GW.  2004.  Paracoccus pantotrophus pseudoazurin is an electron donor to cytochrome c peroxidase. Biochemistry. {43}:{11214-11225}., Number {35}, 1155 16TH ST, NW, WASHINGTON, DC 20036 USA: AMER CHEMICAL SOC Abstract

The gene for pseudoazurin was isolated from Paracoccus pantotrophus LMD 52.44 and expressed in a heterologous system with a yield of 54.3 mg of pure protein per liter of culture. The gene and protein were shown to be identical to those from P. pantotrophus LMD 82.5. The extinction coefficient of the protein was re-evaluated and was found to be 3.00 mM(-1) cm(-1) at 590 nm. It was confirmed that the oxidized protein is in a weak monomer/dimer equilibrium that is ionic- strength-dependent. The pseudoazurin was shown to be a highly active electron donor to cytochrome c peroxidase, and activity showed an ionic strength dependence consistent with an electrostatic interaction. The pseudoazurin has a very large dipole moment, the vector of which is positioned at the putative electron-transfer site, His81, and is conserved in this position across a wide range of blue copper proteins. Binding of the peroxidase to pseudoazurin causes perturbation of a set of NMR resonances associated with residues on the His81 face, including a ring of lysine residues. These lysines are associated with acidic residues just back from the rim, the resonances of which are also affected by binding to the peroxidase. We propose that these acidic residues moderate the electrostatic influence of the lysines and so ensure that specific charge interactions do not form across the interface with the peroxidase.

de Melo, JS, Moura AP, Melo MJ.  2004.  Photophysical and spectroscopic studies of Indigo derivatives in their keto and leuco forms. Journal of Physical Chemistry A. 108:6975-6981., Number 34 AbstractWebsite
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2003
Carvoeiras, P, Rodrigues MJ, A.G. B, Ortigueira MD.  2003.  A Prototype software for the Diagnostic of Atrial fibrillation. XXIV Congresso Português de Cardiologia and Revista Portuguesa de Cardiologia. III. Abstract

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Albelda, MT, Aguilar J, Alves S, Aucejo R, Diaz P, Lodeiro C, Lima JC, Garcia-Espana E, Pina F, Soriano C.  2003.  Potentiometric, NMR, and fluorescence-emission studies on the binding of adenosine 5 '-triphosphate (ATP) by open-chain polyamine receptors containing naphthylmethyl and/or anthrylmethyl groups. Helvetica Chimica Acta. 86:3118-3135., Number 9 Abstract
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Urze, P, Moniz A, Barroso S.  2003.  Practices and trends of telework in the Portuguese industry: the results of surveys in the textile, metal and software sectors. , Number 5628: University Library of Munich, Germany Abstract

The aim of the TeleRisk Project on labour relations and professional risks within the context of teleworking in Portugal – supported by IDICT – Institute for Development and Inspection of Working Conditions (Ministry of Labour), is to study the practices and forms of teleworking in the manufacturing sectors in Portugal. The project chose also the software industry as a reference sector, even though it does not intend to exclude from the study any other sector of activity or the so-called “hybrid” forms of work. However, the latter must have some of the characteristics of telework. The project thus takes into account the so-called “traditional” sectors of activity, namely textile and machinery and metal engineering (machinery and equipment), not usually associated to this type of work. However, telework could include, in the so-called “traditional” sectors, other variations that are not found in technologically based sectors. One of the evaluation methods for the dynamics associated to telework consisted in carrying out surveys by means of questionnaires, aimed at employers in the sectors analysed. This paper presents some of the results of those surveys. It is important to mention that, being a preliminary analysis, it means that it does not pretend to have exhausted all the issues in the survey, but has meant that it shows the bigger tendencies, in terms of teleworking practices, of the Portuguese industry.

Carvoeiras, P, Rodrigues MJ, A.G. B, Ortigueira MD.  2003.  A Prototype software for the Diagnostic of Atrial fibrillation. XXIV Congresso Português de Cardiologia and Revista Portuguesa de Cardiologia. III Abstract
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2002
Rodrigues, CM, Sola S, Castro RE, Laires PA, Brites D, Moura JJ.  2002.  Perturbation of membrane dynamics in nerve cells as an early event during bilirubin-induced apoptosis, Jun. J Lipid Res. 43:885-94., Number 6 AbstractWebsite

Increased levels of unconjugated bilirubin, the end product of heme catabolism, impair crucial aspects of nerve cell function. In previous studies, we demonstrated that bilirubin toxicity may be due to cell death by apoptosis. To characterize the sequence of events leading to neurotoxicity, we exposed developing rat brain astrocytes and neurons to unconjugated bilirubin and investigated whether changes in membrane dynamic properties can mediate apoptosis. Bilirubin induced a rapid, dose-dependent increase in apoptosis, which was nevertheless preceded by impaired mitochondrial metabolism. Using spin labels and electron paramagnetic resonance spectroscopy analysis of whole cell and isolated mitochondrial membranes exposed to bilirubin, we detected major membrane perturbation. By physically interacting with cell membranes, bilirubin induced an almost immediate increase in lipid polarity sensed at a superficial level. The enhanced membrane permeability coincided with an increase in lipid fluidity and protein mobility and was associated with significant oxidative injury to membrane lipids. In conclusion, apoptosis of nerve cells induced by bilirubin is mediated by its primary effect at physically perturbing the cell membrane. Bilirubin directly interacts with membranes influencing lipid polarity and fluidity, protein order, and redox status. These data suggest that nerve cell membranes are primary targets of bilirubin toxicity.

Roque, A, Lodeiro C, Pina F, Maestri M, Ballardini R, Balzani V.  2002.  Photochromic properties of 3-methyl-substituted flavylium salts. European Journal of Organic Chemistry. :2699-2709., Number 16 AbstractWebsite
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Branco, LC, Rosa JN, Ramos JJM, Afonso CAM.  2002.  Preparation and characterization of new room temperature ionic liquids. Chemistry-a European Journal. 8:3671-3677., Number 16 AbstractWebsite
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Macanita, AL, Moreira PF, Lima JC, Quina FH, Yihwa C, Vautier-Giongo C.  2002.  Proton transfer in anthocyanins and related flavylium salts. Determination of ground-state rate constants with nanosecond laser flash photolysis. Journal of Physical Chemistry a. 106:1248-1255., Number 7 Abstract
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2001
Glaser, T, Bertini I, Moura JJ, Hedman B, Hodgson KO, Solomon EI.  2001.  Protein effects on the electronic structure of the [Fe4S4]2+ cluster in ferredoxin and HiPIP, May 23. J Am Chem Soc. 123:4859-60., Number 20 AbstractWebsite
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