Gaspar, D, Fernandes SN, dea Oliveira G, Fernandes JG, Grey P, Pontes RV, Pereira L, Martins R, Godinho MH, Fortunato E.
2014.
{Nanocrystalline cellulose applied simultaneously as the gate dielectric and\~{}the substrate in flexible field effect transistors.}, mar. Nanotechnology. 25:94008., Number 9
AbstractCotton-based nanocrystalline cellulose (NCC), also known as nanopaper, one of the major sources of renewable materials, is a promising substrate and component for producing low cost fully recyclable flexible paper electronic devices and systems due to its properties (lightweight, stiffness, non-toxicity, transparency, low thermal expansion, gas impermeability and improved mechanical properties).Here, we have demonstrated for the first time a thin transparent nanopaper-based field effect transistor (FET) where NCC is simultaneously used as the substrate and as the gate dielectric layer in an \{$\backslash$textquoteright\}interstrate\{$\backslash$textquoteright\} structure, since the device is built on both sides of the NCC films; while the active channel layer is based on oxide amorphous semiconductors, the gate electrode is based on a transparent conductive oxide.Such hybrid FETs present excellent operating characteristics such as high channel saturation mobility (>7\~{}cm(2)\~{}V (-1)\~{}s(-1)), drain-source current on/off modulation ratio higher than 10(5), enhancement n-type operation and subthreshold gate voltage swing of 2.11\~{}V/decade. The NCC film FET characteristics have been measured in air ambient conditions and present good stability, after two weeks of being processed, without any type of encapsulation or passivation layer. The results obtained are comparable to ones produced for conventional cellulose paper, marking this out as a promising approach for attaining high-performance disposable electronics such as paper displays, smart labels, smart packaging, RFID (radio-frequency identification) and point-of-care systems for self-analysis in bioscience applications, among others.
Pereira, L, Gaspar D, Guerin D, a Delattre, Fortunato E, Martins R.
2014.
{The influence of fibril composition and dimension on the performance of paper gated oxide transistors.}, mar. Nanotechnology. 25:094007., Number 9
AbstractPaper electronics is a topic of great interest due the possibility of having low-cost, disposable and recyclable electronic devices. The final goal is to make paper itself an active part of such devices. In this work we present new approaches in the selection of tailored paper, aiming to use it simultaneously as substrate and dielectric in oxide based paper field effect transistors (FETs). From the work performed, it was observed that the gate leakage current in paper FETs can be reduced using a dense microfiber/nanofiber cellulose paper as the dielectric. Also, the stability of these devices against changes in relative humidity is improved. On other hand, if the pH of the microfiber/nanofiber cellulose pulp is modified by the addition of HCl, the saturation mobility of the devices increases up to 16 cm(2) V(-1) s(-1), with an ION/IOFF ratio close to 10(5).
Barbosa, DJ, Serrat R, Mirra S, Quevedo M, Gomez de Barreda E, Avila J, Ferreira LM, Branco PS, Fernandes E, de Bastos ML, Capela JP, Soriano E, Carvalho F.
2014.
The Mixture of ``Ecstasy{''} and Its Metabolites Impairs Mitochondrial Fusion/Fission Equilibrium and Trafficking in Hippocampal Neurons, at In Vivo Relevant Concentrations, JUN. TOXICOLOGICAL SCIENCES. 139, Number 2
Abstractn/a
Safari, L, Amaro P, Santos JP, Fratini F.
2014.
Angular and polarization analysis for two-photon decay of <span class="aps-inline-formula"><math xmlns="http://www.w3.org/1998/Math/MathML"><mrow><mn>2</mn><mi>s</mi></mrow></math>&, Jul 29. Physical Review A. 90:014502., Number 1
AbstractThe amplitude of two-photon transitions between hyperfine states in hydrogenlike ions is derived based on the relativistic Dirac equation and second-order perturbation theory. We study angular and linear polarization properties of the photon pair emitted in the decay of $2s$ states, where spin-flip and non-spin-flip transitions are highlighted. We pay particular attention to hydrogenlike uranium, since it is an ideal candidate for investigating relativistic and high-multipole effects, such as spin-flip transitions. Two types of emission patterns are identified: (i) non-spin-flip transitions are found to be characterized by an angular distribution of the type $W($\theta${})$\sim${}1+{cos}^{2}$\theta${}$ while the polarizations of the emitted photons are parallel; and (ii) spin-flip transitions have somewhat smaller decay rates and are found to be characterized by an angular distribution of the type $W($\theta${})$\sim${}1$-${}1/3{cos}^{2}$\theta${}$ while the polarizations of the emitted photons are orthogonal, where $$\theta${}$ is the angle between photons directions. Deviations due to nondipole and relativistic contributions are evaluated for both types of transitions. This work is the first step toward exploring the effect of the nucleus over the angular and polarization properties of the photon pairs emitted by two-photon transitions.
Fratini, F, Safari L, Hayrapetyan AG, Jankala K, Amaro P, Santos JP.
2014.
Quantized form factor shift in the presence of free electron laser radiation, Jul 01. EPL (Europhysics Letters). 107:13002., Number 1: IOP Publishing
AbstractIn electron scattering, the target form factors contribute significantly to the diffraction pattern and carry information on the target electromagnetic charge distribution. Here we show that the presence of electromagnetic radiation, as intense as currently available in free electron lasers, shifts the dependence of the target form factors by a quantity that depends on the number of photons absorbed or emitted by the electron as well as on the parameters of the electromagnetic radiation. As example, we show the impact of intense ultraviolet and soft X-ray radiation on elastic electron scattering by the Ne-like argon ion and by the xenon atom. We find that the shift brought by the radiation to the form factor is of the order of some percent. Our results may open up a new avenue to explore matter with the assistance of laser.
Fortunato, {EMC}, Águas {HMB}, Busani {TL}, de Martins {RFP}, Baptista {PMRV}.
2014.
Experimental optimization of a passive planar rhombic micromixer with obstacles for effective mixing in a short channel length, jan. RSC Advances. 4:56013–56025., Number 99: RSC - Royal Society of Chemistry
AbstractThis paper presents the performance of a passive planar rhombic micromixer with diamond-shaped obstacles and a rectangular contraction between the rhombi. The device was experimentally optimized using water for high mixing efficiency and a low pressure drop over a wide range of Reynolds numbers (Re = 0.1-117.6) by varying geometrical parameters such as the number of rhombi, the distance between obstacles and the contraction width. Due to the large amount of data generated, statistical methods were used to facilitate and improve the results of the analysis. The results revealed a rank of factors influencing mixing efficiency: Reynolds number > number of rhombi > contraction width > interobstacles distance. The pressure drop measured after three rhombi depends mainly on Re and interobstacle distance. The resulting optimum geometry for the low Re regime has a contraction width of 101 mu m and inter-obstacles distance of 93 mu m, while for the high Re regime a contraction width of 400 v and inter-obstacle distance of 121 mu m are more appropriate. These mixers enabled 80% mixing efficiency creating a pressure drop of 6.0 Pa at Re = 0.1 and 5.1 x 10(4) Pa at Re = 117.6, with a mixer length of 2.5 mu m. To the authors' knowledge, the developed mixer is one of the shortest planar passive micromixers reported to date.
Veigas, B, Branquinho R, {Vaz Pinto} J, Wojcik {PJ}, de Martins {RFP}, Fortunato {EMC}, Baptista {PMRV}.
2014.
Ion sensing (EIS) real-time quantitative monitorization of isothermal DNA amplification, feb. Biosensors & Bioelectronics. 52:50–55.: Elsevier
AbstractField-effect-based devices are becoming a basic structural element in a new generation of microbiosensors. Reliable molecular characterization of DNA and/or RNA is of paramount importance for disease diagnostics and to follow up alterations in gene expression profiles. The use of such devices for point-of-need diagnostics has been hindered by the need of standard or real-time PCR amplification procedures. The present work focuses on the development of a tantalum pentoxide (Ta2O5) based sensor for the real-time label free detection of DNA amplification via loop mediated isothermal amplification (LAMP) allowing for quantitative analysis of the cMYC proto-oncogene. The strategy based on the field effect sensor was tested within a range of 1 x 10(8)-10(11) copies of target DNA, and a linear relationship between the log copy number of the initial template DNA and threshold time was observed allowing for a semi-quantitative analysis of DNA template. The concept offers many of the advantages of isothermal quantitative real-time DNA amplification in a label free approach and may pave the way to point-of-care quantitative molecular analysis focused on ease of use and low cost.
Barbosa, DJ, Capela JP, Silva R, Vilas-Boas V, Ferreira LM, Branco PS, Fernandes E, de Bastos ML, Carvalho F.
2014.
The mixture of ``ecstasy{''} and its metabolites is toxic to human SH-SY5Y differentiated cells at in vivo relevant concentrations, FEB. ARCHIVES OF TOXICOLOGY. 88:455-473., Number 2
Abstractn/a
Barbosa, DJ, Capela JP, Silva R, Ferreira LM, Branco PS, Fernandes E, Bastos ML, Carvalho F.
2014.
``Ecstasy{''}-induced toxicity in SH-SY5Y differentiated cells: role of hyperthermia and metabolites, FEB. ARCHIVES OF TOXICOLOGY. 88:515-531., Number 2
Abstractn/a
Veigas, B, Fernandes {AR}, Baptista P.
2014.
AuNPs for identification of molecular signatures of resistance, aug. Frontiers in Microbiology. 5: Frontiers Research Foundation
AbstractThe increasing levels of drug resistance are one of biggest threats to overcome microbial infection. The ability to rapidly and accurately detect a given pathogen and its drug resistance profile is essential for the appropriate treatment of patients and for preventing further spread of drug-resistant strains. The predictive and informative value of these molecular markers needs to be translated into robust surveillance tools that correlate to the target and extent of resistance, monitor multiresistance and provide real time assessment at point-of-need. Rapid molecular assays for the detection of drug-resistance signatures in clinical specimens are based on the detection of specific nucleotide sequences and/or mutations within pre-selected biomarkers in the genome, indicative of the presence of the pathogen and/or associated with drug resistance. DNA and/or RNA based assays offer advantages over phenotypic assays, such as specificity and time from collection to result. Nanotechnology has provided new and robust tools for the detection of pathogens and more crucially to the fast and sensitive characterisation of molecular signatures of drug resistance. Amongst the plethora of nanotechnology based approaches, gold nanoparticles have prompt for the development of new strategies and platforms capable to provide valuable data at point-of-need with increased versatility but reduced costs. Gold nanoparticles, due to their unique spectral, optical and electrochemical properties, are one of the most widely used nanotechnology systems for molecular diagnostics. This review will focus on the use of gold nanoparticles for screening molecular signatures of drug resistance that have been reported thus far, and provide a critical evaluation of current and future developments of these technologies assisting pathogen identification and characterisation.
Conde, J, Larguinho M, Cordeiro A, Raposo {LR }, Costa {PM }, Santos S, Diniz {MS }, Fernandes {AR}, Baptista {PV}.
2014.
Gold-nanobeacons for gene therapy: Evaluation of genotoxicity, cell toxicity and proteome profiling analysis, aug. Nanotoxicology. 8:521–532., Number 5: Informa Healthcare
AbstractAntisense therapy is a powerful tool for post-transcriptional gene silencing suitable for down-regulating target genes associated to disease. Gold nanoparticles have been described as effective intracellular delivery vehicles for antisense oligonucleotides providing increased protection against nucleases and targeting capability via simple surface modification. We constructed an antisense gold-nanobeacon consisting of a stem-looped oligonucleotide double-labelled with 3′-Cy3 and 5′-Thiol-C6 and tested for the effective blocking of gene expression in colorectal cancer cells. Due to the beacon conformation, gene silencing was directly detected as fluorescence increases with hybridisation to target, which can be used to assess the level of silencing. Moreover, this system was extensively evaluated for the genotoxic, cytotoxic and proteomic effects of gold-nanobeacon exposure to cancer cells. The exposure was evaluated by two-dimensional protein electrophoresis followed by mass spectrometry to perform a proteomic profile and 3-(4,5-Dimethylthiazol-2- Yl)-2,5-Diphenyltetrazolium Bromide (MTT) assay, glutathione-S-transferase assay, micronucleus test and comet assay to assess the genotoxicity. This integrated toxicology evaluation showed that the proposed nanotheranostics strategy does not exhibit significant toxicity, which is extremely relevant when translating into in vivo systems.
Morawiec, S, Mendes MJ, Filonovich SA, Mateus T, Mirabella S, Águas H, Ferreira I, Simone F, Fortunato E, Martins R, Priolo F, Crupi I.
2014.
Photocurrent enhancement in thin a-Si: H solar cells via plasmonic light trapping, 8-13 Jun. CLEO: Science and Innovations. : Optical Society of America
AbstractPhotocurrent enhancement in thin a-Si:H solar cells due to the plasmonic light trapping is investigated, and correlated with the morphology and the optical properties of the self-assembled silver nanoparticles incorporated in the cells’ back reflector.
Roma-Rodrigues, C, Fernandes AR.
2014.
Genetics of hypertrophic cardiomyopathy: advances and pitfalls in molecular diagnosis and therapy, 2014/10/03. The Application of Clinical Genetics. 7:195-208.: Dove Medical Press
AbstractHypertrophic cardiomyopathy (HCM) is a primary disease of the cardiac muscle that occurs mainly due to mutations (>1,400 variants) in genes encoding for the cardiac sarcomere. HCM, the most common familial form of cardiomyopathy, affecting one in every 500 people in the general population, is typically inherited in an autosomal dominant pattern, and presents variable expressivity and age-related penetrance. Due to the morphological and pathological heterogeneity of the disease, the appearance and progression of symptoms is not straightforward. Most HCM patients are asymptomatic, but up to 25% develop significant symptoms, including chest pain and sudden cardiac death. Sudden cardiac death is a dramatic event, since it occurs without warning and mainly in younger people, including trained athletes. Molecular diagnosis of HCM is of the outmost importance, since it may allow detection of subjects carrying mutations on HCM-associated genes before development of clinical symptoms of HCM. However, due to the genetic heterogeneity of HCM, molecular diagnosis is difficult. Currently, there are mainly four techniques used for molecular diagnosis of HCM, including Sanger sequencing, high resolution melting, mutation detection using DNA arrays, and next-generation sequencing techniques. Application of these methods has proven successful for identification of mutations on HCM-related genes. This review summarizes the features of these technologies, highlighting their strengths and weaknesses. Furthermore, current therapeutics for HCM patients are correlated with clinically observed phenotypes and are based on the alleviation of symptoms. This is mainly due to insufficient knowledge on the mechanisms involved in the onset of HCM. Tissue engineering alongside regenerative medicine coupled with nanotherapeutics may allow fulfillment of those gaps, together with screening of novel therapeutic drugs and target delivery systems.
F. S. Silva, T, M. D. R. S. Martins L, Guedes da Silva FMC, Kuznetsov ML, Fernandes AR, Silva A, Pan C-J, Lee J-F, Hwang B-J, J. L. Pombeiro A.
2014.
Cobalt Complexes with Pyrazole Ligands as Catalyst Precursors for the Peroxidative Oxidation of Cyclohexane: X-ray Absorption Spectroscopy Studies and Biological Applications, 2014/04/01. Chemistry – An Asian Journal. 9(4):1132-1143.: WILEY-VCH Verlag
Abstractn/a
Correia, IL, Franco IS, de Sá-Nogueira I.
2014.
Towards Novel Amino Acid-Base Contacts in Gene Regulatory Proteins: AraR – A Case Study, 11. PLoS ONE. 9:e111802., Number 11: Public Library of Science
AbstractAraR is a transcription factor involved in the regulation of carbon catabolism in Bacillus subtilis. This regulator belongs to the vast GntR family of helix-turn-helix (HTH) bacterial metabolite-responsive transcription factors. In this study, AraR-DNA specific interactions were analysed by an in vitro missing-contact probing and validated using an in vivo model. We show that amino acid E30 of AraR, a highly conserved residue in GntR regulators, is indirectly responsible for the specificity of amino acid-base contacts, and that by mutating this residue it will be possible to achieve new specificities towards DNA contacts. The results highlight the importance in DNA recognition and binding of highly conserved residues across certain families of transcription factors that are located in the DNA-binding domain but not predicted to specifically contact bases on the DNA. These new findings not only contribute to a more detailed comprehension of AraR-operator interactions, but may also be useful for the establishment of a framework of rules governing protein-DNA recognition.
Gaspar, D, Pimentel AC, Mendes MJ, Mateus T, Falcão BP, Leitão JP, Soares J, Araújo A, Vicente A, Filonovich SA, Águas H, Martins R, Ferreira I.
2014.
Ag and Sn Nanoparticles to Enhance the Near-Infrared Absorbance of a-Si:H Thin Films. Plasmonics. 9(5):1015–1023.
AbstractSilver (Ag) and tin (Sn) nanoparticles (NPs) were deposited by thermal evaporation onto heated glass substrates with a good control of size, shape and surface coverage. This process has the advantage of allowing the fabrication of thin-film solar cells with incorporated NPs without vacuum break, since it does not require chemical processes or post-deposition annealing. The X-ray diffraction, TEM and SEM properties are correlated with optical measurements and amorphous silicon hydrogenated (a-Si:H) films deposited on top of both types of NPs show enhanced absorbance in the near-infrared. The results are interpreted with electromagnetic modelling performed with Mie theory. A broad emission in the near-infrared region is considerably increased after covering the Ag nanoparticles with an a-Si:H layer. Such effect may be of interest for possible down-conversion mechanisms in novel photovoltaic devices.
Neves, N, Lagoa A, Calado J, do Rego BAM, Fortunato E, Martins R, Ferreira I.
2014.
Al-doped ZnO nanostructured powders by emulsion detonation synthesis – Improving materials for high quality sputtering targets manufacturing. J. Eur. Ceram. Soc.. 34(10):2325-2338.
AbstractEmulsion detonation synthesis method was used to produce undoped and Al-doped ZnO nanostructured powders (0.5–2.0 wt.% Al2O3). The synthesized powders present a controlled composition and a morphology which is independent on the doping level. The XRD results indicate wurtzite as the single phase for undoped ZnO and the presence of gahnite as secondary phase for Al-doped ZnO powders. The sintering behavior of each powder was studied based on their linear shrinkage and shrinkage rate curves, showing the high sinterability of the powders. Activation energies for densification in the earlier stage were calculated for all compositions and possible sintering mechanisms are suggested depending on the doping level. The high chemical homogeneity and sinterability and the lower electrical resistivity of the bulk Al-doped sintered samples demonstrates the feasibility of emulsion detonation synthesis for the production of high quality Al-doped ZnO powders to be used in ceramic sputtering targets manufacture.
Soares, PIP, Ferreira I, Borges JP.
2014.
Application of Hyperthermia for Cancer Treatment: Recent Patents Review. Topics in Anti-Cancer Research, Vol. 3. (
Atta-ur-Rahman, Khurshid Zaman, Eds.).:342-383.: Bentham Science Publishers
AbstractCancer is one of the main causes of death in the world and its incidence increases every day. Current treatments are insufficient and present many breaches. Hyperthermia is an old concept and was early established as a cancer treatment option, mainly in superficial cancers. More recently, the concept of intracellular hyperthermia emerged wherein magnetic particles are concentrated at the tumor site and remotely heated using an applied magnetic field to achieve hyperthermic temperatures (42-45ºC). Many patents have been registered in this area since the year 2000. This chapter presents the most relevant information organized in two main categories according to the use or not of nanotechnology. The patents without nanotechnology were divided into the following subcategories: 1) external Radio-Frequency devices; 2) hyperthermic perfusion; 3) frequency enhancers; 4) applying heat to the target site using a catheter; and 5) injection of magnetic and ferroelectric particles. The patents with nanotechnology were divided into three subcategories: 1) hyperthermia devices; 2) nanoparticles; and 3) nanostructures. The use of magnetic nanoparticles is a very promising treatment approach since it may be used for diagnostic and treatment. Magnetic nanoparticle could be applied to detect and diagnose the tumor and to carry a pharmacological active drug to be delivered in the tumor site or apply hyperthermia through an external magnetic field.
Soares, PIP, Ferreira IMM, Borges JPMR.
2014.
Application of hyperthermia for cancer treatment: recent patents review. Topics in anti-cancer research. :342-383., USA: Bentham Science Publishers
AbstractCancer is one of the main causes of death in the world and its incidence increases every
day. Current treatments are insufficient and present many breaches. Hyperthermia is an old
concept and was early established as a cancer treatment option, mainly in superficial
cancers. More recently, the concept of intracellular hyperthermia emerged wherein magnetic
particles are concentrated at the tumor site and remotely heated using an applied magnetic
field to achieve hyperthermic temperatures (42-45ºC). Many patents have been registered in
this area since the year 2000. This chapter presents the most relevant information organized
in two main categories according to the use or not of nanotechnology.