Export 1622 results:
Sort by: Author Title Type [ Year  (Desc)]
2017
Castanheiro, JE, Fonseca IM, Ramos AM, Vital J.  2017.  Tungstophosphoric acid immobilised in SBA-15 as an efficient heterogeneous acid catalyst for the conversion of terpenes and free fatty acids. Microporous and Mesoporous Materials. 249:16-24. AbstractWebsite

Alkoxylation of α−pinene, β−pinene and limonene was performed in the presence of SBA-15-occluded tungstophosphoric acid (HPW). The HPW was immobilised in SBA-15 using the sol-gel method. The catalysts were characterised by N2 adsorption, FT-IR, Raman spectroscopy, X-Ray diffraction, ICP-AES and TEM. A series of catalysts with different heteropolyacid loadings ranging from 1.8 to 19.3 wt. % were prepared. PW4-SBA-15 (with 10.8 wt. %) exhibited the highest catalytic activity for the alkoxylation of α-pinene with ethanol. An approximately 53% selectivity to α-terpinyl ethyl ether was observed over the PW-SBA-15 catalysts. PW4-SBA-15 was also used as a catalyst for the alkoxylation of other terpenes, including β-pinene and limonene. The PW4-SBA-15 catalyst exhibited high catalytic stability for the alkoxylation of α-pinene with ethanol. PW4-SBA-15 was also used as a catalyst for the esterification of free fatty acids (i.e., palmitic, stearic and oleic acids) with ethanol. Good catalytic activity was observed for the PW4-SBA-15 catalyst with the different substrates used in the esterifications.

Lourenço, SC, Torres CAV, Nunes D, Duarte P, Freitas F, Reis MAM, Fortunato E, Moldão-Martins M, da Costa LB, Alves VD.  2017.  Using a bacterial fucose-rich polysaccharide as encapsulation material of bioactive compounds. International Journal of Biological Macromolecules. 104:1099-1106. AbstractWebsite

The potential of a bacterial exopolysaccharide named FucoPol, produced by the bacterium Enterobacter A47, as encapsulation matrix was explored. Spherical capsules with a smooth surface were produced by spray drying. The obtained microcapsules had average diameters ranging from 0.5 to 26.7μm and presented thin walls (thickness from 222 to 1094nm). The capsules were loaded with two bioactive compounds: gallic acid (GA) and oregano essential oil (OEO). Both bioactive materials were encapsulated in FucoPol particles, retaining their antioxidant activity after the drying process. Release studies showed that GA release in simulated gastric and intestinal fluids was faster than that of OEO, envisaging that the latter had established stronger interactions with the polymer matrix. These results suggest that FucoPol has a good potential for use as encapsulating material of bioactive compounds for application in several areas, including food, cosmetic or pharmaceutical products.

2016
Campos, SP, de Pinto ML, Gomes G, de Pinho PG, Monteiro JA, Felix LM, Branco PS, Ferreira LM, Antunes LM.  2016.  Expression of CYP1A1 and CYP1A2 in the liver and kidney of rabbits after prolonged infusion of propofol, OCT. EXPERIMENTAL AND TOXICOLOGIC PATHOLOGY. 68:521-531., Number 9 Abstract
n/a
Correia, MAS, Otrelo-Cardoso AR, Schwuchow V, {Sigfridsson Clauss} KGV, Haumann M, Romão MJ, Leimkühler S, Santos-Silva T.  2016.  {The Escherichia coli Periplasmic Aldehyde Oxidoreductase Is an Exceptional Member of the Xanthine Oxidase Family of Molybdoenzymes}, oct. ACS Chemical Biology. 11:2923–2935., Number 10 AbstractWebsite

The xanthine oxidase (XO) family comprises molybdenum-dependent enzymes that usually form homodimers (or dimers of heterodimers/trimers) organized in three domains that harbor two [2Fe-2S] clusters, one FAD, and a Mo cofactor. In this work, we crystallized an unusual member of the family, the periplasmic aldehyde oxidoreductase PaoABC from Escherichia coli. This is the first example of an E. coli protein containing a molybdopterin-cytosine-dinucleotide cofactor and is the only heterotrimer of the XO family so far structurally characterized. The crystal structure revealed the presence of an unexpected [4Fe-4S] cluster, anchored to an additional 40 residues subdomain. According to phylogenetic analysis, proteins containing this cluster are widely spread in many bacteria phyla, putatively through repeated gene transfer events. The active site of PaoABC is highly exposed to the surface with no aromatic residues and an arginine (PaoC-R440) making a direct interaction with PaoC-E692, which acts as a base catalyst. In order to understand the importance of R440, kinetic assays were carried out, and the crystal structure of the PaoC-R440H variant was also determined.

Nunes, D, Calmeiro TRR, Nandy S, Pinto JVV, Pimentel A, Barquinha P, Carvalho PAA, Walmsley JCC, Fortunato E, Martins R.  2016.  {Charging effects and surface potential variations of Cu-based nanowires}, nov. Thin Solid Films. 601:45–53. AbstractWebsite

The present work reports charging effects and surface potential variations in pure copper, cuprous oxide and cupric oxide nanowires observed by electrostatic force microscopy (EFM) and Kelvin probe force microscopy (KPFM). The copper nanowires were produced by wet synthesis, oxidation into cuprous oxide nanowires was achieved through microwave irradiation and cupric oxide nanowires were obtained via furnace annealing in atmospheric conditions. Structural characterization of the nanowires was carried out by X-ray diffraction, scanning electron microscopy, transmission electron microscopy and energy dispersive X-ray spectroscopy. During the EFM experiments the electrostatic field of the positive probe charged negatively the Cu-based nanowires, which in turn polarized the SiO2 dielectric substrate. Both the probe/nanowire capacitance as well as the substrate polarization increased with the applied bias. Cu2O and CuO nanowires behaved distinctively during the EFM measurements in accordance with their band gap energies. The work functions (WF) of the Cu-based nanowires, obtained by KPFM measurements, yielded WFCuO {\textgreater} WFCu {\textgreater} WFCu2O.

Cordeiro, M, Giestas L, Lima {JC }, Baptista {PMV }.  2016.  BioCode gold-nanobeacon for the detection of fusion transcripts causing chronic myeloid leukemia, may. Journal of Nanobiotechnology. 14, Number 1: BioMed Central (BMC) Abstract

BACKGROUND: Gold-nanobeacons (Au-nanobeacons) have proven to be versatile systems for molecular diagnostics and therapeutic actuators. Here, we present the development and characterization of two gold nanobeacons combined with Förster resonance energy transfer (FRET) based spectral codification for dual mode sequence discrimination. This is the combination of two powerful technologies onto a single nanosystem.RESULTS: We proved this concept to detect the most common fusion sequences associated with the development of chronic myeloid leukemia, e13a2 and e14a2. The detection is based on spectral shift of the donor signal to the acceptor, which allows for corroboration of the hybridization event. The Au-nanobeacon acts as scaffold for detection of the target in a homogenous format whose output capability (i.e. additional layer of information) is potentiated via the spectral codification strategy.CONCLUSIONS: The spectral coded Au-nanobeacons permit the detection of each of the pathogenic fusion sequences, with high specificity towards partial complementary sequences. The proposed BioCode Au-nanobeacon concept provides for a nanoplatform for molecular recognition suitable for cancer diagnostics.

Mendes, R, Carreira B, Baptista {PV}, Fernandes {AR}.  2016.  Non-small cell lung cancer biomarkers and targeted therapy - two faces of the same coin fostered by nanotechnology, mar. Expert Review of Precision Medicine and Drug Development. 1:155–168., Number 2: Taylor & Francis Abstract

Lung cancer is the leading cause of cancer-related mortality in the world, non-small lung cancer (NSCLC) is the most frequent subtype (85% of the cases). Within this subtype, adenocarcinoma and squamous cell carcinoma are the most frequent. New therapeutic strategies based on targeted delivery of drugs have relied on the use of biomarkers derived from the patients’ molecular profiling. Several biomarkers have been found to be useful for use as targets for precision therapy in NSCLC, such as mutations in the epidermal growth factor receptor, v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog, anaplastic lymphoma kinase, mesenchymal-epithelial transition factor receptor tyrosine kinase, BRAF, c-ros oncogene 1, P53 and phosphatase with tensin homology. Current developments in Nanomedicine have allowed for multifunctional systems capable of delivering therapeutics with increased precision to the target site/tissue, while simultaneously assisting in diagnosis. Here, we review the use of biomarkers in nanotechnology translation in NSCLC management.

Vinhas, R, Tolmatcheva A, Canto R, Ribeiro P, Lourenco A, {de Sousa} {AB}, Baptista {PMRV}, de Fernandes {MANCR}.  2016.  A novel mutation in CEBPA gene in a patient with acute myeloid leukemia, mar. Leukemia & Lymphoma. 57:711–713., Number 3: TAYLOR & FRANCIS LTD Abstract
n/a
Silva, CAC, Figueiredo FCA, Rodrigues R, Sairre MI, Gonçalves M, Matos I, Fonseca IM, Mandelli D, Carvalho WA.  2016.  Enhancing the biodiesel manufacturing process by use of glycerin to produce hyacinth fragrance, Jun. Clean Technologies and Environmental Policy. 18:1551–1563., Number 5 AbstractWebsite

Oxidized and sulfonated-activated carbons (AC) were tested in the catalytic conversion of glycerol by acetalization reactions. The solids were treated with concentrated nitric acid and/or fuming sulfuric acid (AC, AC-N, AC-S, and AC-NS). The presence of sulfur and an increase in the acidity of the solids demonstrate the suitability of the oxidation as well as the sulfonation process, especially in the sample treated with concentrated nitric acid and fuming sulfuric acid (AC-NS). The best catalyst for the reaction of glycerol acetalization with phenylacetaldehyde was AC-NS, with a phenylacetaldehyde conversion of 95 {%} after 90 min at 383 K and selectivity of 88 and 12 {%}, respectively, to dioxolane and dioxane. These products can be used as hyacinth fragrance flavoring compounds. Furthermore, a contribution of homogeneous catalysis in these systems was not identified. Thus, we identified a possibility of glycerol conversion, a biodiesel by-product, into value-added products by suitable catalysts produced from activated carbons.

Deuermeier, J, Wardenga HF, Morasch J, Siol S, Nandy S, Calmeiro T, Martins R, Klein A, Fortunato E.  2016.  {Highly conductive grain boundaries in copper oxide thin films}, jun. JOURNAL OF APPLIED PHYSICS. 119, Number 23 Abstract
n/a
Vinhas, R, Correia C, Ribeiro P, Lourenco A, {de Sousa} {AB}, de Fernandes {MANCR}, Baptista {PMRV}.  2016.  Colorimetric assessment of BCR-ABL1 transcripts in clinical samples via gold nanoprobes, jul. Analytical and Bioanalytical Chemistry. 408:5277–5284., Number 19: Springer Abstract

Gold nanoparticles functionalized with thiolated oligonucleotides (Au-nanoprobes) have been used in a range of applications for the detection of bioanalytes of interest, from ions to proteins and DNA targets. These detection strategies are based on the unique optical properties of gold nanoparticles, in particular, the intense color that is subject to modulation by modification of the medium dieletric. Au-nanoprobes have been applied for the detection and characterization of specific DNA sequences of interest, namely pathogens and disease biomarkers. Nevertheless, despite its relevance, only a few reports exist on the detection of RNA targets. Among these strategies, the colorimetric detection of DNA has been proven to work for several different targets in controlled samples but demonstration in real clinical bioanalysis has been elusive. Here, we used a colorimetric method based on Au-nanoprobes for the direct detection of the e14a2 BCR-ABL fusion transcript in myeloid leukemia patient samples without the need for retro-transcription. Au-nanoprobes directly assessed total RNA from 38 clinical samples, and results were validated against reverse transcription-nested polymerase chain reaction (RT-nested PCR) and reverse transcription-quantitative polymerase chain reaction (RT-qPCR). The colorimetric Au-nanoprobe assay is a simple yet reliable strategy to scrutinize myeloid leukemia patients at diagnosis and evaluate progression, with obvious advantages in terms of time and cost, particularly in low- to medium-income countries where molecular screening is not routinely feasible.

Cramer, T, Sacchetti A, Lobato MT, Barquinha P, Fischer V, Benwadih M, Bablet J, Fortunato E, Martins R, Fraboni B.  2016.  {Radiation-Tolerant Flexible Large-Area Electronics Based on Oxide Semiconductors}, jul. ADVANCED ELECTRONIC MATERIALS. 2, Number 7 Abstract
n/a
Conde, J, Tian F, {de la Fuente} {JM }, Baptista {PMRV}.  2016.  Editorial: Cancer Nanotheranostics: What Have We Learned So Far?, jan Frontiers in Chemistry. 3: Frontiers Media Abstract
n/a
Brás, JLA, Pinheiro BA, Cameron K, Cuskin F, Viegas A, Najmudin S, Bule P, Pires VMR, Romão MJ, Bayer EA, Spencer HL, Smith S, Gilbert HJ, Alves VD, Carvalho AL, Fontes CMGA.  2016.  Diverse specificity of cellulosome attachment to the bacterial cell surface, dec. Scientific Reports. 6:38292.: The Author(s) AbstractWebsite

During the course of evolution, the cellulosome, one of Nature's most intricate multi-enzyme complexes, has been continuously fine-tuned to efficiently deconstruct recalcitrant carbohydrates. To facilitate the uptake of released sugars, anaerobic bacteria use highly ordered protein-protein interactions to recruit these nanomachines to the cell surface. Dockerin modules located within a non-catalytic macromolecular scaffold, whose primary role is to assemble cellulosomal enzymatic subunits, bind cohesin modules of cell envelope proteins, thereby anchoring the cellulosome onto the bacterial cell. Here we have elucidated the unique molecular mechanisms used by anaerobic bacteria for cellulosome cellular attachment. The structure and biochemical analysis of five cohesin-dockerin complexes revealed that cell surface dockerins contain two cohesin-binding interfaces, which can present different or identical specificities. In contrast to the current static model, we propose that dockerins utilize multivalent modes of cohesin recognition to recruit cellulosomes to the cell surface, a mechanism that maximises substrate access while facilitating complex assembly.

Cordeiro, M, Pedrosa P, Carlos {FF}, Lopez A, Baptista {PV}.  2016.  Gold nanoparticles for diagnostics: Advances towards points of care, dec. Diagnostics. 6, Number 4: MDPI - Multidisciplinary Digital Publishing Institute Abstract

The remarkable physicochemical properties of gold nanoparticles (AuNPs) have prompted developments in the exploration of biomolecular interactions with AuNP-containing systems, in particular for biomedical applications in diagnostics. These systems show great promise in improving sensitivity, ease of operation and portability. Despite this endeavor, most platforms have yet to reach maturity and make their way into clinics or points of care (POC). Here, we present an overview of emerging and available molecular diagnostics using AuNPs for biomedical sensing that are currently being translated to the clinical setting.

Bernardo, M, Rodrigues S, Lapa N, Matos I, Lemos F, Batista MKS, Carvalho AP, Fonseca I.  2016.  High efficacy on diclofenac removal by activated carbon produced from potato peel waste, Aug. International Journal of Environmental Science and Technology. 13:1989–2000., Number 8 AbstractWebsite

In the present study, a novel porous carbon obtained by K2CO3 activation of potato peel waste under optimized conditions was applied for the first time as liquid-phase adsorbent of sodium diclofenac in parallel with a commercial activated carbon. The biomass-activated carbon presented an apparent surface area of 866 m2 g−1 and well-developed microporous structure with a large amount of ultramicropores. The obtained carbon presented leaching and ecotoxicological properties compatible with its safe application to aqueous medium. Kinetic data of laboratory-made and commercial sample were best fitted by the pseudo-second-order model. The commercial carbon presented higher uptake of diclofenac, but the biomass carbon presented the higher adsorption rate which was associated with its higher hydrophilic nature which favoured external mass transfer. Both adsorbents presented adsorption isotherms that were best fitted by Langmuir model. The biomass carbon and the commercial carbon presented adsorption monolayer capacities of 69 and 146 mg g−1, and Langmuir constants of 0.38 and 1.02 L mg−1, respectively. The better performance of the commercial sample was related to its slightly higher micropore volume, but the most remarkable effect was the competition of water molecules in the biomass carbon.

Roma-Rodrigues, C, Alves-Barroco C, Raposo {LR }, Costa {MN }, Fortunato E, Baptista {PMRV}, de Fernandes {MANCR}, Santos-Sanches I.  2016.  Infection of human keratinocytes by Streptococcus dysgalactiae subspecies dysgalactiae isolated from milk of the bovine udder, apr. Microbes And Infection. 18:290–293., Number 4: Elsevier Science B.V., Inc Abstract

Streptococcus dysgalactiae subsp. dysgalactiae (SDSD) are considered exclusive animal pathogens; however, a putative zoonotic upper limb cellulitis, a prosthetic joint infection and an infective endocarditis were described in humans. To unravel if bovine SDSD isolates are able to infect human cells, the adherence and internalization to human primary keratinocytes of two bovine SDSD strains isolated from milk collected from udder were analyzed. Bacterial adhesion assays and confocal microscopy indicate a high adherence and internalization of SDSD isolates to human cells, suggesting for the first time the ability of bovine isolates to infect human cells. (C) 2015 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

Aguirre, LE, de Oliveira A, Seč D, Čopar S, Almeida PL, Ravnik M, Godinho MH, Žumer S.  2016.  Sensing surface morphology of biofibers by decorating spider silk and cellulosic filaments with nematic microdroplets, 2016/02/02. Proceedings of the National Academy of Sciences. 113(5):1174. AbstractWebsite

Biological microfibers are remarkable materials with diverse structural and mechanical properties, such as high wear-resistance, elasticity, and biodegradability. However, with current techniques, there are few robust ways to sense the surface properties of the fibers, which crucially affect the organization of the fibers and their interactions with the surrounding material. In this paper, we show that surfaces of diverse biofibers, including spider silks and cellulosic fibers, can be easily sensed by depositing droplets of a nematic fluid onto the fibers. The droplets reveal the surface properties of the fibers via their optical images, notably showing also the fiber chirality. Further, the droplets are used to study the entanglement of biofibers, as a route toward novel biological and bioinspired materials.Probing the surface morphology of microthin fibers such as naturally occurring biofibers is essential for understanding their structural properties, biological function, and mechanical performance. The state-of-the-art methods for studying the surfaces of biofibers are atomic force microscopy imaging and scanning electron microscopy, which well characterize surface geometry of the fibers but provide little information on the local interaction potential of the fibers with the surrounding material. In contrast, complex nematic fluids respond very well to external fields and change their optical properties upon such stimuli. Here we demonstrate that liquid crystal droplets deposited on microthin biofibers—including spider silk and cellulosic fibers—reveal characteristics of the fibers’ surface, performing as simple but sensitive surface sensors. By combining experiments and numerical modeling, different types of fibers are identified through the fiber-to-nematic droplet interactions, including perpendicular and axial or helicoidal planar molecular alignment. Spider silks align nematic molecules parallel to fibers or perpendicular to them, whereas cellulose aligns the molecules unidirectionally or helicoidally along the fibers, indicating notably different surface interactions. The nematic droplets as sensors thus directly reveal chirality of cellulosic fibers. Different fiber entanglements can be identified by depositing droplets exactly at the fiber crossings. More generally, the presented method can be used as a simple but powerful approach for probing the surface properties of small-size bioobjects, opening a route to their precise characterization.

Sequeira, SO, Coutinho ML, Lima JC, Phillips AJL, Macedo MF, Cabrita EJ.  2016.  4-MUF-NAG for fungal biomass determination: Scope and limitations in the context of biodeterioration studies, 2016. Journal of Cultural Heritage. 22:992-998. AbstractWebsite
n/a
Cavero, AM, Melo MJ, Miranda MA, Castro R, Casanova C.  2016.  Beatus manuscripts under the microscope: the Alcobaca Beatus and the Iberian Cistercian tradition revisited, 2016. Journal of Medieval Iberian Studies. 8(2):217-251. AbstractWebsite
n/a
Cordeiro, M, Giestas L, Lima JC, Baptista PMV.  2016.  BioCode gold-nanobeacon for the detection of fusion transcripts causing chronic myeloid leukemia, 2016. Journal of Nanobiotechnology. 14 AbstractWebsite
n/a
Melo, MJ, Araujo R, Castro R, Casanova C.  2016.  Colour degradation in medieval manuscripts, 2016. Microchemical Journal. 124:837-844. AbstractWebsite
n/a
Santoro, S, Moro AJ, Portugal CAM, Crespo JG, Coelhoso IM, Lima JC.  2016.  Development of oxygen and temperature sensitive membranes using molecular probes as ratiometric sensor, 2016. Journal of Membrane Science. 514:467-475. AbstractWebsite
n/a
Alejo-Armijo, A, Salido S, Altarejos J, Parola AJ, Gago S, Basilio N, Cabrita L, Pina F.  2016.  Effect of Methyl, Hydroxyl, and Chloro Substituents in Position 3 of 3,4,7-Trihydroxyflavylium: Stability, Kinetics, and Thermodynamics, 2016. Chemistry-a European Journal. 22(35):12495-12505. AbstractWebsite
n/a