This is the second interim report of the research project "Information Society, Work and the Generation of New Forms of Social Exclusion" (SOWING). It is based on a firm survey conducted in the eight regions participating in the research project — Flanders (Belgium), Lazio (Italy), Niederösterreich (Austria), Portugal, the Republic of Ireland, the Stuttgart area (Germany), the Tampere region (Finland) and the West London area (U.K.). The aim of this report is to present a broad overview of the collected data. In general, only simple statistical methods have been applied. The report focuses on a regional comparison; however, the data have also been analysed by firm size, measured by quantity of staff, and industrial sector. It should be seen as a first step in the data analysis; it may also give some hints for a more strategic analysis of the survey data.

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Adenosine triphosphate sulfurylase catalyzes the formation of adenosine 5'-phosphosulfate from adenosine triphosphate and sulfate. The enzyme plays a crucial role in sulfate activation, the key step for sulfate utilization, and has been purified from crude extracts of Desulfovibrio desulfuricans ATCC 27774 and Desulfovibrio gigas. Both proteins are homotrimers [141 kDa (3 x 47) for D. desulfuricans and 147 kDa (3 x 49) for D. gigas] and have been identified, for the first time, as metalloproteins containing cobalt and zinc. EXAFS reveals that either cobalt or zinc binds endogenously at presumably equivalent metal binding sites and is tetrahedrally coordinated to one nitrogen and three sulfur atoms. Furthermore, the electronic absorption spectra display charge-transfer bands at 335 and 370 nm consistent with sulfur coordination to cobalt, and as expected for a distorted tetrahedral cobalt geometry, d-d bands are observed at 625, 666, and 715 nm. This geometry is supported by the observation of high-spin Co2+ EPR signals at g approximately 6.5.

We present a high-resolution bacterial contig map of 3.4 Mb of genomic DNA in human chromosome 21q11-q21, encompassing the region of elevated disomic homozygosity in Down Syndrome-associated abnormal myelopoiesis and leukemia, as well as the markers, which has shown a strong association with Alzheimer's Disease that has never been explained. The map contains 89 overlapping PACs, BACs, or cosmids in three contigs (850, 850, and 1500 kb) with two gaps (one of 140-210 kb and the second < 5 kb). To date, eight transcribed sequences derived by cDNA selection, exon trapping, and/or global EST sequencing have been positioned onto the map, and the only two genes so far mapped to this cytogenetic region, STCH and RIP140 have been precisely localized. This work converts a further 10% of chromosome 21q into a high-resolution bacterial contig map, which will be the physical basis for the long-range sequencing of this region. The map will also enable positional derivation of new transcribed sequences, as well as new polymorphic probes, that will help in elucidation of the role the genes in this region may play in abnormal myelopoiesis and leukemia associated with trisomy 21 and Alzheimer's Disease.

The autosomal dominant disorder Rieger syndrome (RIEG) shows genetic heterogeneity and has a phenotype characterized by malformations of the anterior segment of the eye, failure of the periumbilical skin to involute, and dental hypoplasia. The main locus for RIEG was mapped to the 4q25-q27 chromosomal segment using a series of cytogenetic abnormalities as well as by genetic linkage to DNA markers. Recently, a bicoid-related homeobox transcription factor gene called RIEG has been cloned, characterized, and proven to cause the 4q25 linked RIEG. Its mode of action in the pathogenesis of RIEG was not conclusively proven, since most etiological mutations detected. In the RIEG sequence caused amino acid substitutions or splice changes in the homeodomain. Through FISH analysis of a 460-kb sequence-ready map (PAC contig) around RIEG that we report in this paper, we demonstrate that the 4q25 linked RIEG disorder can arise from the haploid, whole-gene deletion of RIEG, but also from a translocation break 90 kb upstream from the gene. The data provide conclusive evidence that physical or functional haploinsufficiency of RIEG is the pathogenic mechanism for Rieger syndrome. The map also defines restriction fragments bearing sequences with a potential key regulatory role in the control of homeobox gene expression.

A novel sulphate-reducing bacterium (Ind 1) was isolated from a biofilm removed from a severely corroded carbon steel structure in a marine environment. Light microscopy observations revealed that cells were Gram-negative, rod shaped and very motile. Partial 16S rRNA gene sequencing and analysis of the fatty acid profile demonstrated a strong similarity between the new species and members from the Desulfovibrio genus. This was confirmed by the results obtained following purification and characterisation of the key proteins involved in the sulphate-reduction pathway. Several metal-containing proteins, such as two periplasmic proteins: hydrogenase and cytochrome c3, and two cytoplasmic proteins: ferredoxin and sulphite reductase, were isolated and purified. The latter proved to be of the desulfoviridin type which is typical of the Desulfovibrio genus. The study of the remaining proteins revealed a high degree of similarity with the homologous proteins isolated from Desulfovibrio gigas. However, the position of the strain within the phylogenetic tree clearly indicates that the bacterium is closely related to Desulfovibrio gabonensis, and these three strains form a separate cluster in the delta subdivision of the Proteobacteria. On the basis of the results obtained, it is suggested that Ind 1 belongs to a new species of the genus Desulfovibrio, and the name Desulfovibrio indonensis is proposed.

The new cylindrical molecule L containing two tetraazamacrocyclic rings linked by two azobenzene pillars displays photoelastic properties, Light absorption at 366 nm gives rise to trans --> cis isomerization of the azobenzene moieties producing two isomers containing one or two cis-azobenzenes, respectively, The three trans-trans (E-E), trans-cis (E-Z) and cis-cis (Z-Z) isomers have been identified and characterized by H-1 NMR spectroscopy, allowing the dependence of their formation percentages with irradiation time to be determined, The sequence of photochemical reactions E-E --> E-Z --> Z-Z allows almost complete conversion of the E-E into the Z-Z isomer at 366 nm and 298 K, Both thermal (k = 1.75 x 10(-5) s(-1) at 313 K) and photo-induced (at 436 and 313 nm) back-isomerization reactions have been studied, The protonation constants of the three isomers in equimolar solutions of water-DMSO indicate a decreasing basicity in the order E-E > E-Z > Z-Z, in agreement with increasing electrostatic repulsion between the positive charges caused by a reduction in the separation between the protonation sites occurring upon Z --> E isomerization.

The structural transformations and photochromic properties of the 7-hydroxyflavylium ion have been investigated by means of the pH jump technique and continuous and pulsed light excitation. The primary photoproduct of UV irradiation of the colorless trans-chalcone form, which is the predominant species at pH 4, is its colorless cis isomer, which rapidly disappears on a time scale of seconds through two competitive processes: i) back-reaction to yield the trans-chalcone form, and ii) formation of the colored flavylium ion and its conjugated quinoidal base. Over minutes or hours (depending on pH), the system reverts quantitatively to its original state. The rate constants and equilibrium constants of the various processes have been obtained and compared with those previously reported for the 4'-hydroxyflavylium and 4',7-dihydroxyflavylium ions. This comparison demonstrates the substituent effect on the rate and equilibrium constants; the effect on the rate constant of the cis-->trans thermal isomerization reaction is particularly strong. For the 7-hydroxyflavylium and 4',7-dihydroxyflavylium ions the pH of the solution plays the role of a tap for the color intensity generated by light excitation. This also means that this system can be viewed as a light-switchable pH indicator.

Some sulfate reducing bacteria can induce nitrate reductase when grown on nitrate containing media being involved in dissimilatory reduction of nitrate, an important step of the nitrogen cycle. Previously, it was reported the purification of the first soluble nitrate reductase from a sulfate-reducing bacteria Desulfovibrio desulfuricans ATCC 27774 (S.A. Bursakov, M.-Y. Liu, W.J. Payne, J. LeGall, I. Moura, and J.J.G. Moura (1995) Anaerobe 1, 55-60). The present work provides further information about this monomeric periplasmic nitrate reductase (Dd NAP). It has a molecular mass of 74 kDa, 18.6 U specific activity, KM (nitrate) = 32 microM and a pHopt in the range 8-9.5. Dd NAP has peculiar properties relatively to ionic strength and cation/anion activity responses. It is shown that monovalent cations (potassium and sodium) stimulate NAP activity and divalent (magnesium and calcium) inhibited it. Sulfate anion also acts as an activator in KPB buffer. NAP native form is protected by phosphate anion from cyanide inactivation. In the presence of phosphate, cyanide even stimulates NAP activity (up to 15 mM). This effect was used in the purification procedure to differentiate between nitrate and nitrite reductase activities, since the later is effectively blocked by cyanide. Ferricyanide has an inhibitory effect at concentrations higher than 1 mM. The N-terminal amino acid sequence has a cysteine motive C-X2-C-X3-C that is most probably involved in the coordination of the [4Fe-4S] center detected by EPR spectroscopy. The active site of the enzyme consists in a molybdopterin, which is capable for the activation of apo-nit-1 nitrate reductase of Neurospora crassa. The oxidized product of the pterin cofactor obtained by acidic hidrolysis of native NAP with sulfuric acid was identified by HPLC chromatography and characterized as a molybdopterin guanine dinucleotide (MGD).

A complete study of the structural pH dependent transformations of the synthetic flavylium salt 4',7-dihydroxyflavylium chloride (DHF), occurring in aqueous solutions, including the basic region, is described. The kinetic study of the transformations occurring in acidic media (quinoidal base (A) reversible arrow flavylium cation (AH(+)) reversible arrow hemiacetal (B) reversible arrow cis-chalone (C-cis) reversible arrow trans-chalcone (C-trans)) allowed to conclude that the cis-trans isomerization is faster than the tautomerization and the hydration processes, which is unique in the anthocyanins family. Results obtained with the parent compound 4'7-dimethoxyglavylium chloride (DMF) with relevance to this study are also presented. In equilibrated basic solution the existence of acid-base equilibria involving the trans-Chalcone (C-trans) and its conjugated bases, (C-trans(-) and C-trans(2)), was detected. Freshly prepared solutions at pH >7 show also the presence of a transient species identified as the ionized quinoidal base (A(-)), which is almost completely converted into C-trans(2-) with a pH dependent rate constant.