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2020
Duczinski, R, Polesso BB, Bernard FL, Ferrari HZ, Almeida PL, Corvo MC, Cabrita EJ, Menezes S, Einloft S.  2020.  Enhancement of CO2/N2 selectivity and CO2 uptake by tuning concentration and chemical structure of imidazolium-based ILs immobilized in mesoporous silica. Journal of Environmental Chemical Engineering. AbstractWebsite

Imidazolium-based ionic liquids (ILs) with different cation alkyl chain ([i-C5mim] or [C4mim]) and inorganic anions ([Cl−], [Tf2N−], [PF6−] and [DCA−]) were synthesized and immobilized in commercial mesoporous silica. The synthesized supported ILs (SILs) were characterized using NMR, FTIR, TGA, BET, SEM and TEM. CO2 sorption capacity, reusability and CO2/N2 selectivity were assessed by the pressure-decay technique. The effects of IL concentration, cation and anion chemical structure in CO2 sorption capacity and CO2/N2 separation performance were evaluated. Tests evidenced that the presence of branching on the cation alkyl side chain increases CO2/N2 selectivity. The immobilization of the IL [i-C5TPIm][Cl] on mesoporous silica in different concentrations (50, 20, 10 and 5 %) revealed that lower IL concentration results in higher CO2 sorption capacity. Immobilization of ILs containing fluorinated anions at low concentrations in the mesoporous silica support may promote the improvement of the CO2/N2 selectivity without interfering on CO2 sorption capacity of the original support. CO2 sorption capacity value shown by sample SIL-5 % - [i-C5TPIm][Tf2N] (79.50 ± 0.70 mg CO2  g-1) was close to the value obtained for the pristine mesoporous silica (81.70 ± 2.20 mg CO2 g-1) and the selectivity (4.30 ± 0.70) was more than twice of the one obtained for the support alone (2.32 ± 0.4). Recycle tests demonstrated that the ILs immobilized in mesoporous silica samples are stable, providing a new option to be used in CO2 capture processes.

Oliveira, B, Veigas B, Fernandes AR, Águas H, Martins R, Fortunato E, Baptista PV.  2020.  Fast Prototyping Microfluidics: Integrating Droplet Digital Lamp for Absolute Quantification of Cancer Biomarkers. Sensors. 20(6) AbstractWebsite

Microfluidic (MF) advancements have been leveraged toward the development of state-of-the-art platforms for molecular diagnostics, where isothermal amplification schemes allow for further simplification of DNA detection and quantification protocols. The MF integration with loop-mediated isothermal amplification (LAMP) is today the focus of a new generation of chip-based devices for molecular detection, aiming at fast and automated nucleic acid analysis. Here, we combined MF with droplet digital LAMP (ddLAMP) on an all-in-one device that allows for droplet generation, target amplification, and absolute quantification. This multilayer 3D chip was developed in less than 30 minutes by using a low-cost and extremely adaptable production process that exploits direct laser writing technology in “Shrinky-dinks” polystyrene sheets. ddLAMP and target quantification were performed directly on-chip, showing a high correlation between target concentration and positive droplet score. We validated this integrated chip via the amplification of targets ranging from five to 500,000 copies/reaction. Furthermore, on-chip amplification was performed in a 10 µL volume, attaining a limit of detection of five copies/µL under 60 min. This technology was applied to quantify a cancer biomarker, c-MYC, but it can be further extended to any other disease biomarker.

Lopes, LGF, Sadler PJ, Bernardes-Génisson V, Moura JJG, Chauvin R, Bernhardt PV, Sousa EHS.  2020.  The fundamental importance of basic science: examples of high-impact discoveries from an international Chemistry Network. Quim Nova. 43:1176-1189.
Zanatta, M, Lopes M, Cabrita EJ, Bernardes CES, Corvo M.  2020.  Handling CO2 sorption mechanism in PIL@IL composites. Journal of CO2 Utilization. 41:101225.: Elsevier AbstractWebsite

The mitigation of climate change effects requires the use of alternative materials and technologies to control CO2 atmospheric levels through its capture, storage and use. In this field, the current work presents the evaluation of two poly(ionic liquid)s (PILs) (poly-1-vinyl-3-ethylimidazolium acetate and hydroxide) combined with free ionic liquid (IL) 1-butyl-3-methylimidolium acetate (BMI·OAc) for CO2 capture. The sorption capacity of PIL@IL composites was evaluated under 20 bar of CO2 at 298 K. Nuclear Magnetic Resonance (NMR) spectroscopy allowed quantification of CO2 sorption (physisorption and/or chemisorption) and in situ study of the PIL−CO2 interaction mechanism. NMR in combination with Molecular Dynamics (MD) simulations suggested a 3D organization of PIL composites, maintaining a similar organization to ILs. Also, the use of aqueous solutions of PIL@IL composites was tested, identifying the optimum conditions for water activation (intrinsic water trapped inside IL structure) for chemisorption. As our main contribution, we demonstrate the possibility to control the sorption pathway towards CO2 physisorption, or CO2 conversion (chemisorption) through carbonation (HCO3−/CO32-) according to the PIL/IL ratio, ions structure and water amount. The use of PIL/IL composites is a promising advance for further CO2 reuse approaching a biomimetic carbonation process.

Honnet, C, Perner-Wilson H, Teyssier M, Fruchard B, Steimle J, Baptista AC, Strohmeier P.  2020.  PolySense: Augmenting Textiles with Electrical Functionality using In-Situ Polymerization. Proceedings of the 2020 CHI Conference on Human Factors in Computing Systems.
Strohmeier, P, Honnet C, Pernet-Wilson H, Teyssier M, Fruchard B, Baptista AC, Steimle J.  2020.  PolySense: How to Make Electrically Functional Textiles. CHI Conference on Human Factors in Computing Systems .
Gavinho, SR, Soares MC, Borges JB, Silva JC, Nogueira ISá, Graça MP.  2020.  Preparation and Characterization of Zinc and Magnesium Doped Bioglasses. Nanoscience and Nanotechnology in Security and Protection against CBRN Threats. :465-475. AbstractWebsite

Peri-implantitis is an infectious disease that affects about one of five patients who receive a dental implant within 5 years after the surgery. To minimize this reaction the development of new biomaterials with antibacterial action is needed that can be used as a coating material in orthodontic implants. In addition, these biomaterials can be doped with several ions, which add specific properties that may act at the cellular level, such as increasing the angiogenesis efficiency. In this work, 45S5 Bioglass® has been used as the base material because it presents higher bioactivity compared to other biomaterials. To add antibacterial function and increase positive effects on bone metabolism, zinc and magnesium ions were introduced in the glass network. The main objective was the synthesis of the 45S5 glass by melt-quenching and study the biological performance as function of the zinc and magnesium concentrations. The structural and biological properties of the prepared samples are discussed.

Esteves, C, Ramou E, Porteira ARP, Barbosa AJM, Roque ACA.  2020.  Seeing the Unseen: The Role of Liquid Crystals in Gas‐Sensing Technologies. Advanced Optical Materials. 1902117:1-29. AbstractPDF

Fast, real-time detection of gases and volatile organic compounds (VOCs) is
an emerging research field relevant to most aspects of modern society, from
households to health facilities, industrial units, and military environments.
Sensor features such as high sensitivity, selectivity, fast response, and low
energy consumption are essential. Liquid crystal (LC)-based sensors fulfill
these requirements due to their chemical diversity, inherent self-assembly
potential, and reversible molecular order, resulting in tunable stimuliresponsive soft materials. Sensing platforms utilizing thermotropic uniaxial
systems—nematic and smectic—that exploit not only interfacial phenomena,
but also changes in the LC bulk, are demonstrated. Special focus is given to
the different interaction mechanisms and tuned selectivity toward gas and
VOC analytes. Furthermore, the different experimental methods used to
transduce the presence of chemical analytes into macroscopic signals are discussed and detailed examples are provided. Future perspectives and trends
in the field, in particular the opportunities for LC-based advanced materials in
artificial olfaction, are also discussed.

Rodrigues, R, Palma SICJ, Correia VJ, Padrao I, Pais J, Banza M, Alves C, Deuermeier J, Martins C, Costa HMA, Ramou E, Silva Pereira C, Roque ACA.  2020.  Sustainable plant polyesters as substrates for optical gas sensors. Materials Today Bio. 8:100083. AbstractPDF

The fast and non-invasive detection of odors and volatile organic compounds (VOCs) by gas sensors and electronic
noses is a growing field of interest, mostly due to a large scope of potential applications. Additional drivers for the
expansion of the field include the development of alternative and sustainable sensing materials. The discovery
that isolated cross-linked polymeric structures of suberin spontaneously self-assemble as a film inspired us to
develop new sensing composite materials consisting of suberin and a liquid crystal (LC). Due to their stimuliresponsive and optically active nature, liquid crystals are interesting probes in gas sensing. Herein, we report
the isolation and the chemical characterization of two suberin types (from cork and from potato peels) resorting to
analyses of gas chromatography–mass spectrometry (GC-MS), solution nuclear magnetic resonance (NMR), and Xray photoelectron spectroscopy (XPS). The collected data highlighted their compositional and structural differences. Cork suberin showed a higher proportion of longer aliphatic constituents and is more esterified than potato
suberin. Accordingly, when casted it formed films with larger surface irregularities and a higher C/O ratio. When
either type of suberin was combined with the liquid crystal 5CB, the ensuing hybrid materials showed distinctive
morphological and sensing properties towards a set of 12 VOCs (comprising heptane, hexane, chloroform,
toluene, dichlormethane, diethylether, ethyl acetate, acetonitrile, acetone, ethanol, methanol, and acetic acid).
The optical responses generated by the materials are reversible and reproducible, showing stability for 3 weeks.
The individual VOC-sensing responses of the two hybrid materials are discussed taking as basis the chemistry of
each suberin type. A support vector machines (SVM) algorithm based on the features of the optical responses was
implemented to assess the VOC identification ability of the materials, revealing that the two distinct suberin-based
sensors complement each other, since they selectively identify distinct VOCs or VOC groups. It is expected that
such new environmentally-friendly gas sensing materials derived from natural diversity can be combined in arrays
to enlarge selectivity and sensing capacity.

Godino-Ojer, M, Matos I, Bernardo M, Carvalho R, G.P. Soares OS, Durán-Valle C, Fonseca IM, Mayoral PE.  2020.  Acidic porous carbons involved in the green and selective synthesis of benzodiazepines. Catalysis Today. 357:64-73. AbstractWebsite

Eco-sustainable and recyclable porous carbons are reported as metal-free catalysts for the synthesis of benzodiazepines for the first time. The porous carbons were able to efficiently catalyse the synthesis of benzodiazepine 1 from o-phenylendiamine 2 and acetone 3 under mild conditions. Both acidic functions and the porosity of the catalysts were determinant features. High conversion values were obtained when using HNO3 oxidized carbons. The highest selectivity to benzodiazepine 1 was obtained in the presence of the most microporous catalyst N-N, which is indicative of the great influence of porous properties. Stronger acid sites and high microporosity of the carbon treated with H2SO4 yield benzodiazepine 1 with total selectivity.

Dias, D, Bernardo M, Matos I, Fonseca I, Pinto F, Lapa N.  2020.  Activation of co-pyrolysis chars from rice wastes to improve the removal of Cr3+ from simulated and real industrial wastewaters. Journal of Cleaner Production. 267:121993. AbstractWebsite

Chromium is one of the most important raw materials for the European Union. Adsorption has become an important process for the recovery of metals from wastewaters, which has led to a demand for low-cost and eco-friendly adsorbents. The objective of this work was to use new and renewable carbon-based adsorbents from rice wastes in the removal/recovery of Cr(III) from synthetic and real wastewaters. Rice wastes were submitted to co-pyrolysis and the resulting char was optimized through physical and/or chemical activations/treatments. A commercial activated carbon was used for comparison purposes. All adsorbents were characterized (including an ecotoxicity test for the char precursor) and submitted to Cr(III) removal assays from a synthetic solution, in which two solid/liquid ratios (S/L) were tested (5 and 10 g/L). The CO2 activated carbon at a S/L = 5 g/L was the biomass-derived adsorbent that performed better, obtaining a maximum Cr(III) uptake capacity of 9.23 mg/g comparable to the one obtained by the commercial adsorbent at the same S/L (9.80 mg/g). The good results on this biomass-derived carbon were due to the effective volatile matter removal during the activation (from 22.7 to 4.25% w/w), which increased both surface area (from <5.0 to 325 m2/g) and ash content (from 30.0 to 40.4% w/w), allowing an increase in Cr(III) removal due to ion exchange mechanism and porosity development. The best adsorbent, under optimized conditions, was also applied to a chromium rich industrial wastewater. The results obtained in this real case application demonstrated a competition effect due to the presence of other ions.

Rodrigues, ARF, Maia MRG, Cabrita ARJ, Oliveira HM, Bernardo M, Lapa N, Fonseca I, Trindade H, Pereira JL, Fonseca AJM.  2020.  Assessment of potato peel and agro-forestry biochars supplementation on in vitro ruminal fermentation. PeerJ. 8:e9488. AbstractWebsite

Background The awareness of environmental and socio-economic impacts caused by greenhouse gas emissions from the livestock sector leverages the adoption of strategies to counteract it. Feed supplements can play an important role in the reduction of the main greenhouse gas produced by ruminants—methane (CH\textsubscript{4}). In this context, this study aims to assess the effect of two biochar sources and inclusion levels on rumen fermentation parameters \textit{in vitro}. Methods Two sources of biochar (agro-forestry residues, AFB, and potato peel, PPB) were added at two levels (5 and 10%, dry matter (DM) basis) to two basal substrates (haylage and corn silage) and incubated 24-h with rumen inocula to assess the effects on CH\textsubscript{4} production and main rumen fermentation parameters \textit{in vitro}. Results AFB and PPB were obtained at different carbonization conditions resulting in different apparent surface areas, ash content, pH at the point of zero charge (pHpzc), and elemental analysis. Relative to control (0% biochar), biochar supplementation kept unaffected total gas production and yield (mL and mL/g DM, \textit{p} = 0.140 and \textit{p} = 0.240, respectively) and fermentation pH (\textit{p} = 0.666), increased CH\textsubscript{4}production and yield (mL and mL/g DM, respectively, \textit{p} = 0.001) and ammonia-N (NH\textsubscript{3}-N, \textit{p} = 0.040), and decreased total volatile fatty acids (VFA) production (\textit{p} < 0.001) and H\textsubscript{2} generated and consumed (\textit{p} ≤ 0.001). Biochar sources and inclusion levels had no negative effect on most of the fermentation parameters and efficiency. Acetic:propionic acid ratio (\textit{p} = 0.048) and H\textsubscript{2} consumed (\textit{p} = 0.019) were lower with AFB inclusion when compared to PPB. Biochar inclusion at 10% reduced H\textsubscript{2} consumed (\textit{p} < 0.001) and tended to reduce total gas production (\textit{p} = 0.055). Total VFA production (\textit{p} = 0.019), acetic acid proportion (\textit{p} = 0.011) and H\textsubscript{2} generated (\textit{p} = 0.048) were the lowest with AFB supplemented at 10%, no differences being observed among the other treatments. The basal substrate affected most fermentation parameters independently of biochar source and level used. Discussion Biochar supplementation increased NH\textsubscript{3}-N content, \textit{iso}-butyric, \textit{iso}-valeric and valeric acid proportions, and decreased VFA production suggesting a reduced energy supply for microbial growth, higher proteolysis and deamination of substrate N, and a decrease of NH\textsubscript{3}-N incorporation into microbial protein. No interaction was found between substrate and biochar source or level on any of the parameters measured. Although AFB and PPB had different textural and compositional characteristics, their effects on the rumen fermentation parameters were similar, the only observed effects being due to AFB included at 10%. Biochar supplementation promoted CH\textsubscript{4} production regardless of the source and inclusion level, suggesting that there may be other effects beyond biomass and temperature of production of biochar, highlighting the need to consider other characteristics to better identify the mechanism by which biochar may influence CH\textsubscript{4} production.

Cordeiro, T, Paninho AB, Bernardo M, Matos I, Pereira CV, Serra AT, Matias A, Ventura MG.  2020.  Biocompatible locust bean gum as mesoporous carriers for naproxen delivery. Materials Chemistry and Physics. 239:121973. AbstractWebsite

The work reports the impregnation of naproxen into locust bean gum mesoporous matrixes with different textural properties. The matrixes were prepared through the dissolution of the biopolymer in water and in two ionic liquids (ILs): [bmim][Cl] and [C2OHmim][Cl] and dried with scCO2. The poor water-soluble pharmaceutical drug naproxen was loaded into the matrixes and the composites were characterized by attenuated total reflectance-Fourier transform infrared spectroscopy and by differential scanning calorimetry; the results were compared with neat ILs and drug. The naproxen release from the matrixes was attempted at pH 7.4. Sustained release of naproxen in the different composites occurs, and consequently the naproxen release has lower rates compared with neat crystalline naproxen dissolution. Nevertheless, it was possible to observe small differences on release profiles for the studied composites. The higher release rate was observed for the composite where [bmim][Cl] was used as solvent, for which the calorimetric analysis revealed full amorphization of the incorporated drug. Cytotoxicity assays reveal that cellular viability in Caco-2 cells is preserved. This fact allied with the biocompatibility of locust bean gum allow for the composites potential application as naproxen controlled/sustained delivery systems with higher drug bioavailability achieved through naproxen amorphization.

Chabert, V, Babel L, Füeg MP, Karamash M, Madivoli ES, Herault N, Dantas JM, Salgueiro CA, Giese B, Fromm KM.  2020.  Kinetics and Mechanism of Mineral Respiration: How Iron Hemes Synchronize Electron Transfer Rates. Angewandte Chemie International Edition. 59:12331-12336., Number 30 AbstractWebsite

Abstract Anaerobic microorganisms of the Geobacter genus are effective electron sources for the synthesis of nanoparticles, for bioremediation of polluted water, and for the production of electricity in fuel cells. In multistep reactions, electrons are transferred via iron/heme cofactors of c-type cytochromes from the inner cell membrane to extracellular metal ions, which are bound to outer membrane cytochromes. We measured electron production and electron flux rates to 5×105 e s−1 per G. sulfurreducens. Remarkably, these rates are independent of the oxidants, and follow zero order kinetics. It turned out that the microorganisms regulate electron flux rates by increasing their Fe2+/Fe3+ ratios in the multiheme cytochromes whenever the activity of the extracellular metal oxidants is diminished. By this mechanism the respiration remains constant even when oxidizing conditions are changing. This homeostasis is a vital condition for living systems, and makes G. sulfurreducens a versatile electron source.

Ribeiro, DO, Viegas A, Pires VMR, Medeiros-Silva J, Bule P, Chai W, Marcelo F, Fontes CMGA, Cabrita EJ, Palma AS, Carvalho AL.  2020.  Molecular basis for the preferential recognition of β1,3-1,4-glucans by the family 11 carbohydrate-binding module from Clostridium thermocellum. The FEBS Journal. 287:2723-2743., Number 13 AbstractWebsite

Understanding the specific molecular interactions between proteins and β1,3-1,4-mixed-linked d-glucans is fundamental to harvest the full biological and biotechnological potential of these carbohydrates and of proteins that specifically recognize them. The family 11 carbohydrate-binding module from Clostridium thermocellum (CtCBM11) is known for its binding preference for β1,3-1,4-mixed-linked over β1,4-linked glucans. Despite the growing industrial interest of this protein for the biotransformation of lignocellulosic biomass, the molecular determinants of its ligand specificity are not well defined. In this report, a combined approach of methodologies was used to unravel, at a molecular level, the ligand recognition of CtCBM11. The analysis of the interaction by carbohydrate microarrays and NMR and the crystal structures of CtCBM11 bound to β1,3-1,4-linked glucose oligosaccharides showed that both the chain length and the position of the β1,3-linkage are important for recognition, and identified the tetrasaccharide Glcβ1,4Glcβ1,4Glcβ1,3Glc sequence as a minimum epitope required for binding. The structural data, along with site-directed mutagenesis and ITC studies, demonstrated the specificity of CtCBM11 for the twisted conformation of β1,3-1,4-mixed-linked glucans. This is mediated by a conformation–selection mechanism of the ligand in the binding cleft through CH-π stacking and a hydrogen bonding network, which is dependent not only on ligand chain length, but also on the presence of a β1,3-linkage at the reducing end and at specific positions along the β1,4-linked glucan chain. The understanding of the detailed mechanism by which CtCBM11 can distinguish between linear and mixed-linked β-glucans strengthens its exploitation for the design of new biomolecules with improved capabilities and applications in health and agriculture. Database Structural data are available in the Protein Data Bank under the accession codes 6R3M and 6R31.

Ferreira, RC, Dias D, Fonseca I, Bernardo M, Pimenta JLCW, Lapa N, de Barros MASD.  2020.  Multi-component adsorption study by using bone char: modelling and removal mechanisms. Environmental Technology. :1-16.: Taylor & Francis AbstractWebsite
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Bernardo, M, Correa CR, Ringelspacher Y, Becker GC, Lapa N, Fonseca I, Esteves IAAC, Kruse A.  2020.  Porous carbons derived from hydrothermally treated biogas digestate. Waste Management. 105:170-179. AbstractWebsite

Porous carbons from digestate-derived hydrochar were produced, characterized and their performance to reclaim phosphate from water was evaluated as a preliminary approach to demonstrate their practical application. In a first step, the digestate was converted into hydrochars through hydrothermal carbonization by using two different pH conditions: 8.3 (native conditions) and 3.0 (addition of H2SO4). The resulting hydrochars did not present significant differences. Consecutively, the hydrochars were activated with KOH to produce activated carbons with enhanced textural properties. The resulting porous carbons presented marked differences: the AC native presented a lower ash content (20.3 wt%) and a higher surface area (SBET = 1106 m2/g) when compared with the AC-H2SO4 (ash content = 43.7 wt% SBET = 503 m2/g). Phosphorus, as phosphate, is a resource present in significative amount in wastewater, causing serious problems of eutrophication. Therefore, the performance of the porous carbons samples to recover phosphate – P(PO43−) – from water was evaluated through exploitation assays that included kinetic studies. The lumped model presented a good fitting to the kinetic data and the obtained uptake capacities were the same for both carbons, 12 mg P(PO43−)/g carbon. Despite the poorer textural properties of AC-H2SO4, this carbon was richer in Ca, Al, Fe, K, and Mg cations which promoted the formation of mineral complexes with phosphate anions. The results obtained in this work are promising for the future development of P(PO43−) enriched carbons that can be used thereafter as biofertilizers in soil amendment applications.

Godino-Ojer, M, Blazquez-García R, Matos I, Bernardo M, Fonseca IM, Pérez Mayoral E.  2020.  Porous carbons-derived from vegetal biomass in the synthesis of quinoxalines. Mechanistic insights. Catalysis Today. 354:90-99. AbstractWebsite

We report herein for the first-time acid biomass-derived carbons from vegetal biomass, with high developed porosity, prepared through integrating method comprising pyrolysis and surface phosphonation, able to efficiently catalyze the synthesis of quinoxalines from 1,2-diamines and α-hydroxi ketones, under aerobic conditions. The obtained results indicate that the reaction is mainly driven by a combination of acid function strength and textural properties in terms of conversion and selectivity. Furthermore, our experimental and theoretical observations suggest that the preferred reaction pathway for this transformation, in the presence of the investigated acid carbon catalysts, involves cascade reactions including imination reaction between reactants, successive imine-enamine and keto-enol tautomerisms, heterocyclization followed by dehydration, and aromatization. While the acid sites seem to be a relevant role in each reaction step, the system formed by activated carbon and molecular oxygen could be behind the last oxidative reaction to give the corresponding nitrogen heterocycles.

Baptista, {PV}.  2020.  RNA Quantification Using Noble Metal Nanoprobes: Simultaneous Identification of Several Different mRNA Targets Using Color Multiplexing and Application to Chronic Myeloid Leukemia Diagnostics. Nanoparticles in Biology and Medicine. (E. Ferrari, M. Soloviev, Eds.).:251–268., United States: Humana Press Abstract

Nanotechnology provides new tools for gene expression analysis that allow for sensitive and specific characterization of prognostic signatures related to cancer. Cancer is a complex disease where multiple gene loci contribute to the phenotype. The ability to simultaneously monitor differential expression originating from each locus allows for a more accurate indication into the degree of cancerous activity than either locus alone. Metal nanoparticles have been widely used as labels for in vitro identification and quantification of target sequences. Here we describe the synthesis of nanoparticles with different noble metal compositions in an alloy format that are then functionalized with thiol-modified ssDNA (nanoprobes). We also show how such nanoprobes are used in a non-cross-linking colorimetric method for the direct detection and quantification of specific mRNA targets, without the need for enzymatic amplification or reverse-transcription steps. The different metals in the alloy provide for distinct absorption spectra due to their characteristic plasmon resonance peaks. The color multiplexing allows for simultaneous identification of different mRNA targets involved in cancer development. A comparison of the absorption spectra of the nanoprobe mixtures taken before and after induced aggregation of metal nanoparticles allows to both identify and quantify each mRNA target. We describe the use of gold and gold–silver alloy nanoprobes for the development of the non-cross-linking method to detect a specific BCR-ABL fusion gene (e.g., e1a2 and e14a2) mRNA target associated with chronic myeloid leukemia (CML) using 10 ng/μL of unamplified total human RNA. Additionally, we demonstrate the use of this approach for the direct diagnostics of CML. This simple methodology takes less than 50 min to complete after total RNA extraction with comparable specificity and sensitivity to the more commonly used methods.

Outis, M, Rosa V, Laia CAT, Lima JC, Barroso S, Carvalho AL, Calhorda MJ, Avilés T.  2020.  Synthesis, Crystal Structure, and DFT Study of Two New Dinuclear Copper(I) Complexes Bearing Ar-BIAN Ligands Functionalized with NO2 Groups. European Journal of Inorganic Chemistry. 2020:2900-2911., Number 30 AbstractWebsite

{Two new bis(aryl-imino)-acenaphthene, Ar-BIAN (Ar = 2

2019
Ribeiro, SO, Granadeiro CM, Almeida PL, Pires J, Valenca R, Campos-Martin JM, Ribeiro JC, de Castro B, Balula SS.  2019.  Effective Zinc-Substituted Keggin Composite To Catalyze the Removal of Sulfur from Real Diesels under a Solvent-Free System, {OCT 9}. Industrial & Engineering Chemistry Research. 58:18540-18549., Number {40} AbstractWebsite

{The Keggin phosphotungstate (PW12) and its zinc derivative (PW11Zn) were tested as oxidative catalysts for desulfurization processes using simulated and real diesels. These compounds were used as homogeneous catalysts, while the corresponding SBA-15 composites were used as heterogeneous catalysts. The comparison of their catalytic performance demonstrated that the zinc-substituted polyoxo-metalate is more efficient than the plenary PW12 structure. Additionally, using the heterogeneous PW11Zn@aptesSBA-15, the sustainability and catalytic efficiency was largely improved, allowing the total sulfur removal from model diesel after 1 h using a small amount of oxidant (H2O2/S = 4) under an oxidative solvent-free system. The desulfurization of real diesels was performed under similar conditions, achieving 87.8% of efficiency using the PW11Zn@aptesSBA-15 catalyst. Furthermore, the catalyst maintained its activity over consecutive desulfurization cycles. The cost-effective operational conditions achieved with PW11Zn@aptesSBA-15 turn this into a promising material to be used in an industrial scale to treat diesel.}

Mirante, F, Gomes N, Branco LC, Cunha-Silva L, Almeida PL, Pillinger M, Gago S, Granadeiro CM, Balula SS.  2019.  Mesoporous nanosilica-supported polyoxomolybdate as catalysts for sustainable desulfurization, {FEB}. Microporous and Mesoporous Materials. 275:163-171. AbstractWebsite

Mesoporous silica nanoparticles (MSNs) strategically functionalized were used to immobilize a homogeneous polyoxomolybdate catalyst {[}PMo12O40](3-) (PMo12), active but unstable. The PMo12@TBA-MSN composite (where TBA refers to surface-tethered tributylammonium groups) conferred high stability to the polyoxomolybdate catalytic center and displayed an increase in efficiency for the oxidative desulfurization (ECODS) of a diesel simulant under sustainable conditions (using H2O2 as oxidant and an ionic liquid, {[}BMIM]PF6, as solvent). Continuous reuse of the catalyst and ionic liquid solvent in consecutive ECODS cycles was successfully performed, avoiding the production of residual wastes. The performance of the PMo12@TBA-MSN catalyst improved upon its reuse, leading to complete desulfurization of a multicomponent model diesel containing benzothiophene derivatives after just 1 h of the catalytic stage of the process. The robust nature of the supported catalyst was indicated by characterization of the recovered solid which showed retention of the structural and chemical integrities.

Ribeiro, SO, Granadeiro CM, Almeida PL, Pires J, Capel-Sanchez MC, Campos-Martin JM, Gago S, de Castro B, Balula SS.  2019.  Oxidative desulfurization strategies using Keggin-type polyoxometalate catalysts: Biphasic versus solvent-free systems, {AUG 1}. Catalysis Today. 333:226-236., Number {SI} AbstractWebsite

Strategic polyoxometalate Keggin-type structural modification was performed to increase the oxidative catalytic performance to desulfurize model and real diesels. The most active lacunar structure {[}PW11O39](7-) (PW11) showed to complete desulfurize a simulated diesel after 60 min at 70 degrees C. Its application as homogeneous catalyst using a biphasic system 1: 1 diesel/acetonitrile needed to use an excess of oxidant (ratio H2O2/S = 8). The immobilization of the PW11 on amine-functionalized SBA-15 supports originated two heterogeneous catalysts PW11@aptesSBA-15 and PW11@tbaSBA-15. The best results were attained with the PW11@aptesSBA-15 catalyst showing identical oxidative desulfurization performance as the homogeneous analogue. As advantage, this heterogeneous catalyst promotes the complete desulfurization of simulated diesel using a solvent-free system, i.e. without the need of acetonitrile use. On the other hand, the same desulfurization efficiency could be achieved using half the amount of oxidant (H2O2/S = 4). The oxidative desulfurization of the real diesel achieved a remarkable 83.4% of efficiency after just 2 h. The recycling capacity of PW11@aptesSBA-15 catalyst was confirmed for eight consecutive cycles using the biphasic and the solvent-free systems. Its stability investigation demonstrates to be higher under the solvent-free system than the biphasic system, without practically any occurrence of PW11 leaching in the first case. On the other hand, the Venturello peroxocomplex {[}PO4\{W(O-2)(2)\}(4)](3-), recognized as active intermediate in the homogeneous biphasic system, was not identified in the heterogeneous catalytic systems.

Almeida, J, Roma-Rodrigues C, Mahmoud {AG }, {Guedes da Silva} F{MC }, Pombeiro {AJL }, Martins {LMDRS }, Baptista {PV}, Fernandes {AR}.  2019.  Structural characterization and biological properties of silver(I) tris(pyrazolyl)methane sulfonate, oct. Journal of Inorganic Biochemistry. 199: Elsevier Abstract

The water-soluble 1D helical coordination polymer [Ag(Tpms)]n (1) [Tpms = tris(pyrazolyl)methane sulfonate, −O3SC(pz)3; pz = pyrazolyl] was synthesized and fully characterized, its single-crystal X-ray diffraction analysis revealing the ligand acting as a bridging chelate N3-donor ligand. The antiproliferative potential of 1 was performed on two human tumour cell lines, A2780 and HCT116, and in normal fibroblasts, with a much higher effect in the former cell line (IC50 of 0.04 μM) as compared to the latter cell line and to normal fibroblasts. Compound 1 does not alter cell cycle progression but interferes with the adherence of A2780 cells triggering cell apoptosis. Apoptosis appears to occur via the extrinsic pathway (no changes in mitochondria membrane potential, reactive oxygen species (ROS) and pro-apoptotic (B-cell lymphoma 2 (BCL-2) associated protein (BAX))/anti-apoptotic (BCL-2) ratio) being this hypothesis also supported by the presence of silver mainly in the supernatants of A2780 cells. Results also indicated that cell death via autophagy was triggered. Proteomic analysis allowed us to confirm that compound 1 is able to induce a stress response in A2780 cells that is related with its antiproliferative activity and the trigger of apoptosis.

Sutradhar, M, Alegria {ECBA }, Ferretti F, Raposo {LR }, {Guedes da Silva} F{MC }, Baptista {PV}, Fernandes {AR}, Pombeiro {AJL }.  2019.  Antiproliferative activity of heterometallic sodium and potassium-dioxidovanadium(V) polymers, nov. Journal of Inorganic Biochemistry. 200: Elsevier Abstract

The syntheses of the heterometallic sodium and potassium-dioxidovanadium 2D polymers, [NaVO2(1κNOO’;2κO”-L)(H2O)]n (1) and [KVO2(1κNOO’;2κO’;3κO”-L)(EtOH)]n (2) (where the κ notation indicates the coordinating atoms of the polydentate ligand L) derived from (3,5-di-tert-butyl-2-hydroxybenzylidene)-2-hydroxybenzohydrazide (H2L) are reported. The polymers were characterized by IR, NMR, elemental analysis and single crystal X-ray diffraction analysis. The antiproliferative potential of 1 and 2 was examined towards four human cancer cell lines (ovarian carcinoma, A2780, colorectal carcinoma, HCT116, prostate carcinoma, PC3 and breast adenocarcinoma, MCF-7cell lines) and normal human fibroblasts. Complex 1 and 2 showed the highest cytotoxic activity against A2780 cell line (IC50 8.2 and 11.3 μM, respectively) with 1 > 2 and an IC50 in the same range as cisplatin (IC50 3.4 μM; obtained in the same experimental conditions) but, interestingly, with no cytotoxicity to healthy human fibroblasts for concentrations up to 75 μM. This high cytotoxicity of 1 in ovarian cancer cells and its low cytotoxicity in healthy cells demonstrates its potential for further biological studies. Our results suggest that both complexes induce ovarian carcinoma cell death via apoptosis and autophagy, but autophagy is the main biological cause of the reduction of viability observed and that ROS (reactive oxygen species) may play an important role in triggering cell death.