Publications

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Journal Article
de Lencastre, H, Wu SW, Pinho MG, Ludovice AM, Filipe S, Gardete S, Sobral R, Gill S, Chung M, Tomasz A.  1999.  Antibiotic resistance as a stress response: complete sequencing of a large number of chromosomal loci in Staphylococcus aureus strain COL that impact on the expression of resistance to methicillin. Microb. Drug Resist. 5:163-175.
Atilano, ML, Pereira PM, Vaz F, Catalão MJ, Reed P, Grilo IR, Sobral RG, Ligoxygakis P, Pinho MG, Filipe SR.  2014.  Bacterial autolysins trim cell surface peptidoglycan to prevent detection by the Drosophila innate immune system. eLife. 3:e02277.
Veiga, H, Jousselin A, Schaeper S, Marques LB, Reed P, Saraiva BM, Wilton J, Filipe SR, Pinho MG.  2023.  Cell division protein FtsK coordinates bacterial chromosome segregation and daughter cell separation. EMBO J. 42:e112140.
Szymczak, P, Filipe SR, Covas G, Vogensen FK, Neves AR, Janzen T.  2018.  Cell wall glycans mediate recognition of the dairy bacterium Streptococcus thermophilus by bacteriophages. Applied and Environmental Microbiology. 84(23):e01847-18.
Szymczak, P, Rau MH, Monteiro JM, Pinho MG, Filipe SR, Vogensen FK, Zeidan AA, Janzen T.  2019.  A comparative genomics approach for identifying host-range determinants in Streptococcus thermophilus bacteriophages. Scientific Reports. 9(1):7991.
Filipe, SR, Severina E, Tomasz A.  2000.  Distribution of the mosaic structured murM genes among natural populations of Streptococcus pneumoniae. J. Bacteriol. 182:6798-6805.
Saraiva, BM, Krippahl L, Filipe SR, Henriques R, Pinho MG.  2021.  eHooke: a tool for automated image analysis of spherical bacteria based on cell cycle progression. Biological Imaging. 1:e3.
Figueiredo, J, Henriques MX, Catalão MJ, Pinheiro S, Narciso AR, Mesquita F, Saraiva BM, Carido M, Cabanes D, Pinho MG, Filipe SR.  2022.  Encapsulation of the septal cell wall protects Streptococcus pneumoniae from its major peptidoglycan hydrolase and host defenses. PLoS Pathogens. 18:e1010516.
Filipe, SR, Severina E, Tomasz A.  2001.  Functional analysis of Streptococcus pneumoniae MurM reveals the region responsible for its specificity in the synthesis of peptidoglycan branched peptides. J. Biol. Chem. 276:39618-39628.
Carvalho, F, Atilano ML, Pombinho R, Covas G, Gallo RL, Filipe SR, Sousa S, Cabanes D.  2015.  L-Rhamnosylation of Listeria monocytogenes wall teichoic acids promotes resistance to antimicrobial peptides by delaying interaction with the membrane. PLoS Pathogens. 11:e1004919.
Aggarwal, SD, Lloyd* AJ, Yerneni SS, Narciso AR, Shepherd J, Roper DI, Dowson C, Filipe* SR, Hiller* NL.  2021.  A Molecular Link between Cell Wall Biosynthesis, Translation Fidelity, and Stringent Response in Streptococcus pneumoniae. Proc. Natl. Acad. Sci. USA. 118(14):e2018089118.
Filipe, SR, Severina E, Tomasz A.  2002.  The murMN operon: a functional connection between antibiotic resistance and antibiotic tolerance in Streptococcus pneumoniae. Proc. Natl. Acad. Sci. USA. 99:1550-1555.
Monteiro, JM, Covas G, Rausch D, Filipe SR, Schneider T, Sahl HG, Pinho MG.  2019.  The pentaglycine bridges of Staphylococcus aureus peptidoglycan are essential for cell integrity. Scientific Reports. 9(1):5010.
Monteiro, JM, Pereira AR, Reichmann NT, Saraiva BM, Fernandes PB, Veiga H, Tavares AC, Santos M, Ferreira MT, Macário V, VanNieuwenhze MS, Filipe SR, Pinho MG.  2018.  Peptidoglycan synthesis drives an FtsZ-treadmilling-independent step of cytokinesis. Nature. 554:528-532.
Sherratt, DJ, Soballe B, Barre F-X, Filipe SR, Massey T, Lau I, Yates J.  2004.  Recombination and chromosome segregation. Phil. Trans. R. Soc. Lond. B. 359:61-69.
Payne, BT, van Knippenberg IC, Bell H, Filipe SR, Sherratt DJ, McGlynn P.  2006.  Replication fork blockage by transcription factor—DNA complexes in Escherichia coli. Nucleic Acids Res. 2006:5194-5202.
Gardete, S, Ludovice AM, Sobral RG, Filipe SR, de Lencastre H, Tomasz A.  2004.  The role of murE in the expression of b-lactam antibiotic resistance in Staphylococcus aureus. J. Bacteriol. 186:1705-1713.
Filipe, SR, Severina E, Tomasz A.  2001.  The role of the murMN operon in penicillin resistance and antibiotic tolerance of Streptococcus pneumoniae. Microb. Drug Resist. 7:303-6.
Lau, IF, Filipe SR, Soballe B, Okstad O-A, Barre F-X, Sherratt DJ.  2003.  Spatial and temporal organization of replicating Escherichia coli chromosomes. Mol Microbiol. 49:731-743.
Reed, P, Atilano ML, Alves R, Hoiczyk E, Sher X, Reichmann NT, Pereira PM, Roemer T, Filipe SR, Pereira-Leal JB, Ligoxygakis P, Pinho MG.  2015.  Staphylococcus aureus survives with a minimal peptidoglycan synthesis machinery but sacrifices virulence and antibiotic resistance. PLoS Pathogens. 11:e1004891.
Thorsing, M, Klitgaard JK, Atilano ML, Skov MN, Kolmos HJ, Filipe SR, Kallipolitis BH.  2013.  Thioridazine induces major changes in global gene expression and cell wall composition in methicillin-resistant Staphylococcus aureus USA300. PLoS One. 8:e64518.
Queda, F, Covas G, Silva T, Santos CA, Bronze MR, Canada FJ, Corvo M, Filipe* SR, Marques* MMB.  2019.  A top-down chemo-enzymatic approach towards N-acetylglucosamine-N-acetylmuramic oligosaccharides: chitosan as a reliable template. Carbohydrate Polymers. 224:115133.
Possoz*, C, Filipe* SR, Grainge I, Sherratt DJ.  2006.  Tracking of controlled Escherichia coli replication fork stalling and restart at repressor-bound DNA in vivo. EMBO J. 25:2596-2604.