Publications

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2014
Penon, O, Moro AJ, Santucci D, Amabilino DB, Lima JC, Perez-Garcia L, Rodriguez L.  2014.  Molecular recognition of aliphatic amines by luminescent Zn-porphyrins. Inorganica Chimica Acta. 417:222-229. Abstract
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Castet, F, Champagne B, Pina F, Rodriguez V.  2014.  A Multistate pH-Triggered Nonlinear Optical Switch. Chemphyschem. 15:2221-2224., Number 11 Abstract
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Florindo, C, Costa A, Matos C, Nunes SL, Matias AN, Duarte CMM, Rebelo LPN, Branco LC, Marrucho IM.  2014.  Novel organic salts based on fluoroquinolone drugs: Synthesis, bioavailability and toxicological profiles. International Journal of Pharmaceutics. 469:179-189., Number 1 Abstract
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Ruivo, A, Muralha VSF, Aguas H, de Matos AP, Laia CAT.  2014.  Time-resolved luminescence studies of Eu3+ in soda-lime silicate glasses. Journal of Quantitative Spectroscopy & Radiative Transfer. 134:29-38. Abstract
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2013
Rondao, R, de Melo JSS, Pina J, Melo MJ, Vitorino T, Parola AJ.  2013.  Brazilwood Reds: The (Photo)Chemistry of Brazilin and Brazilein, 2013. Journal of Physical Chemistry A. 117:10650-10660. Abstract

The ground and excited state (in the singlet state, S-1) acid-base equilibria, together with the photophysical properties of the two main constituents of brazilwood, brazilin and brazilein, have been investigated in aqueous solutions in the pH range: -1 < pH < 10. Brazilin is the colorless reduced form of brazilein where three ground and three excited state species (BredHn, with n = 2-4 representing the protonated hydroxyl groups) are observed with two corresponding acidity constants: pK(a1) = 6.6 and pK(a2) = 9.4 (pK(a1)(*) = 4.7 and pK(a2)(*) = 9.9, obtained from the Forster cycle). In the case of brazilein, three ground species (pK(a1) = 6.5 and pK(a2) = 9.5) and four excited state species were identified (again from the Forster cycle: pK(a1)(*) = 3.9 and pK(a2)(*) = 9.8). The colorless species (brazilin) presents a high fluorescence quantum yield (phi(F) = 0.33) and competitive radiative channel (k(F) = 1.3 x 10(9) s(-1)) over radiationless processes (k(NR) = 2.6 x 10(9) s(-1)). In contrast to this behavior, brazilein displays a phi(F) value 2 orders of magnitude lower and a dominance of the radiationless decay pathways, which is suggested to be linked to an excited state proton transfer leading to a quinoidal-like structure. This is further supported by time-resolved data (obtained in a ps time domain). The overall data indicates that brazilin is more prone to degradation than brazilein, mainly due to the high efficiency of the racliationless decay channel (likely through internal conversion), which confers a stabilizing inherent characteristic to the latter. In the case of brazilein, the efficiency of the radiationless channel is linked to an excited state intramolecular proton transfer resulting from an excited state equilibrium involving neutral and zwitterionic tautomeric species of this compound. Furthermore, a theoretical study has been performed with the determination of the optimized ground-state and excited molecular geometries for the two compounds together with the prediction of the lowest vertical one-electron excitation energy and the relevant molecular orbital contours and charge densities changes using density functional theory calculations. These were found to corroborate differences in acidity in the ground and excited states.

Avo, J, Martins S, Parola AJ, Lima JC, Branco PS, Ramalho JPP, Pereira A.  2013.  A Family of Styrylcoumarins: Synthesis, Spectroscopic, Photophysical and Photochemical Properties, 2013. Chempluschem. 78:789-792. Abstract
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Oliveira, J, da Silva MA, Jorge Parola A, Mateus N, Bras NF, Ramos MJ, de Freitas V.  2013.  Structural characterization of a A-type linked trimeric anthocyanin derived pigment occurring in a young Port wine, 2013. Food Chemistry. 141:1987-1996. Abstract
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Lipinska, ME, Teixeira DMD, Laia CAT, Silva AMG, Rebelo SLH, Freire C.  2013.  beta-Functionalized zinc(II)aminoporphyrins by direct catalytic hydrogenation. Tetrahedron Letters. 54:110-113., Number 1 Abstract
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Ferreira, JL, Avila MJ, Melo MJ, Ramos AM.  2013.  Early aqueous dispersion paints: Portuguese artists' use of polyvinyl acetate, 1960s-1990s. Studies in Conservation. 58:211-225., Number 3 Abstract
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Aguilo, E, Gavara R, Lima JC, Llorca J, Rodriguez L.  2013.  From Au(I) organometallic hydrogels to well-defined Au(0) nanoparticles. Journal of Materials Chemistry C. 1:5538-5547., Number 35 Abstract
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Gavara, R, Llorca J, Lima JC, Rodriguez L.  2013.  A luminescent hydrogel based on a new Au(I) complex. Chemical Communications. 49:72-74., Number 1 Abstract
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Brissos, R, Ramos D, Lima JC, Mihan FY, Borras M, de Lapuente J, Dalla Cort A, Rodriguez L.  2013.  Luminescent zinc salophen derivatives: cytotoxicity assessment and action mechanism studies. New Journal of Chemistry. 37:1046-1055., Number 4 Abstract
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Giannicchi, I, Brissos R, Ramos D, de Lapuente J, Lima JC, Dalla Cort A, Rodriguez L.  2013.  Substituent Effects on the Biological Properties of Zn-Salophen Complexes. Inorganic Chemistry. 52:9245-9253., Number 16 Abstract
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Ruivo, A, Ventura MG, Gomes da Silva MDR, Laia CAT.  2013.  Synthesis of gold nanoparticles in sol-gel glass porogens containing bmim BF4 ionic liquid. Journal of Sol-Gel Science and Technology. 68:234-244., Number 2 Abstract
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Garcia-Estevez, I, Gavara R, Alcalde-Eon C, Rivas-Gonzalo JC, Quideau S, Teresa Escribano-Bailon M, Pina F.  2013.  Thermodynamic and Kinetic Properties of a New Myrtillin-Vescalagin Hybrid Pigment. Journal of Agricultural and Food Chemistry. 61:11569-11578., Number 47 Abstract
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2012
Rondao, R, de Melo JS, Melo MJ, Parola AJ.  2012.  Excited-State Isomerization of Leuco Indigo, 2012. Journal of Physical Chemistry A. 116:2826-2832. Abstract

The photoreaction of indigo and two other derivatives in its reduced (leuco) form was investigated by absorption and fluorescence (steady-state and time-resolved) techniques. The fluorescence quantum yield (phi(F)) dependence with the UV irradiation time was found to increase up to a value of phi(F) approximate to 0.2-0.3 (after 16 min) for indigo and phi(F) = 0.2 (at similar to 150 min) for its derivative 4,4'-dibutoxy-7,7'-dimethoxy-5,5'-dinitroindigo (DBMNI). With a model compound, where rotation around the central C-C bond is blocked, the phi(F) value was found constant with the UV irradiation time. Time-resolved fluorescence revealed that initially the decays are fitted with a biexponential law (with 0.12 and 2.17 ns), ending with an almost monoexponential decay (similar to 2.17 ns). Quantum yields for the isomerization photoreaction (phi(R)) were also obtained for indigo and DBMNI with values of 0.9 and 0.007, respectively. The results are rationalized in terms of a photoisomerization (conversion) reaction occurring in the first excited singlet state of trans to cis forms of leuco indigo.

Rodriguez, L, Lima JC, Ferrer M, Rossell O, Engeser M.  2012.  3D Au-Ag heterometallic supramolecular cage: Triplet capture by heavy atom effect. Inorganica Chimica Acta. 381:195-202. Abstract
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Rodriguez, L, Ferrer M, Crehuet R, Anglada J, Lima JC.  2012.  Correlation between Photophysical Parameters and Gold-Gold Distances in Gold(I) (4-Pyridyl)ethynyl Complexes. Inorganic Chemistry. 51:7636-7641., Number 14 Abstract
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Ferraz, R, Branco LC, Marrucho IM, Araujo JMM, Rebelo LPN, da Ponte MN, Prudencio C, Noronha JP, Petrovski Z.  2012.  Development of novel ionic liquids based on ampicillin. Medchemcomm. 3:494-497., Number 4 Abstract
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Rosa, J, Conde J, de la Fuente JM, Lima JC, Baptista PV.  2012.  Gold-nanobeacons for real-time monitoring of RNA synthesis. Biosensors & Bioelectronics. 36:161-167., Number 1 Abstract
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Conde, J, Rosa J, Lima JC, Baptista PV.  2012.  Nanophotonics for Molecular Diagnostics and Therapy Applications. International Journal of Photoenergy. Abstract
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Roldao, A, Mellado MCM, Lima JC, Carrondo MJT, Alves PM, Oliveira R.  2012.  On the Effect of Thermodynamic Equilibrium on the Assembly Efficiency of Complex Multi-Layered Virus-Like Particles (VLP): the Case of Rotavirus VLP. Plos Computational Biology. 8, Number 2 Abstract
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2011
Oliveira, J, Petrov V, Parola AJ, Pina F, Azevedo J, Teixeira N, Bras NF, Fernandes PA, Mateus N, Ramos MJ, de Freitas V.  2011.  Chemical Behavior of Methylpyranomalvidin-3-O-glucoside in Aqueous Solution Studied by NMR and UV-Visible Spectroscopy, 2011. Journal of Physical Chemistry B. 115:1538-1545. Abstract

In the present work, the proton-transfer reactions of the methylpyranomalvidin-3-O-glucoside pigment in water with different pH values was studied by NMR and UV-visible spectroscopies. The results showed four equilibrium forms: the methylpyranomalvidin-3-O-glucoside cation, the neutral quinoidal base, the respective anionic quinoidal base, and a dianionic base unprotonated at the methyl group. According to the NMR data, it seems that for methylpyranomalvidin-3-O-glucoside besides the acid base equilibrium between the pyranoflavylium cation and the neutral quinoidal base, a new species is formed at pD 4.88-6.10. This is corroborated by the appearance of a new set of signals in the NMR spectrum that may be assigned to the formation of hemiketal/cis-chalcone species to a small extent. The two ionization constants (pK(a1) and pK(a2)) obtained by both methods (NMR and UV-visible) for methylpyranomalvidin-3-O-glucoside are in agreement (pK(a1) = 5.17 +/- 0.03; pK(a2) = 8.85 +/- 0.08; and pK(a1) = 4.57 +/- 0.07; pK(a2) = 8.23 +/- 0.04 obtained by NMR and UV-visible spectroscopies, respectively). Moreover, the fully dianionic unprotonated form (at the methyl group) of the methylpyranomalvidin-3-O-glucoside is converted slowly into a new structure that displays a yellow color at basic pH. On the basis of the results obtained through LC-MS and NMR, the proposed structure was found to correspond to the flavonol syringetin-3-glucoside.

de Sa, MH, Ferreira JL, Melo MJ, Ramos AM.  2011.  An AFM contribution to the understanding of surface effects caused by ageing and cleaning on acrylic glass. The Shadows by Lourdes Castro, a case study. Surface and Interface Analysis. 43:1165-1170., Number 8 Abstract
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de Sa, MH, Eaton P, Ferreira JL, Melo MJ, Ramos AM.  2011.  Ageing of vinyl emulsion paints - an atomic force microscopy study. Surface and Interface Analysis. 43:1160-1164., Number 8 Abstract
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