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Carvalho, G., Lemos, P. C., Oehmen, A., & Reis, M. A. M. (2007). Denitrifying phosphorus removal : Linking the process performance with the microbial community structure, 41, 4383–4396. doi: 10.1016/j.watres.2007.06.065
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Oehmen, A., Lemos, P. C., Carvalho, G., Yuan, Z., Keller, J., Blackall, L. L., & Reis, M. A. M. (2007). Advances in enhanced biological phosphorus removal: From micro to macro scale. Water Research, 41(11), 2271–2300. doi: 10.1016/j.watres.2007.02.030
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Dias, J. M. L., Oehmen, A., Serafim, L. S., Lemos, P. C., Reis, M. A. M., & Oliveira, R. (2008). Metabolic modelling of polyhydroxyalkanoate copolymers production by mixed microbial cultures. BMC Systems Biology, 2, 1–21. doi: 10.1186/1752-0509-2-59
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Oehmen, A., Lopez-Vazquez, C. M., Carvalho, G., Reis, M. A. M., & van Loosdrecht, M. C. M. (2010). Modelling the population dynamics and metabolic diversity of organisms relevant in anaerobic/anoxic/aerobic enhanced biological phosphorus removal processes. Water Research, 44(15), 4473–4486. doi: 10.1016/j.watres.2010.06.017
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Carvalho, G., Marques, R., Lopes, A. R., Faria, C., Noronha, J. P., & Oehmen, A. (2010). Biological treatment of propanil and 3 , 4-dichloroaniline : Kinetic and microbiological characterisation. Water Research, 44(17), 4980–4991. doi: 10.1016/j.watres.2010.08.006
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Oehmen, A., Carvalho, G., Lopez-Vazquez, C. M., van Loosdrecht, M. C. M., & Reis, M. A. M. (2010). Incorporating microbial ecology into the metabolic modelling of polyphosphate accumulating organisms and glycogen accumulating organisms. Water Research, 44(17), 4992–5004. doi: 10.1016/j.watres.2010.06.071
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Oehmen, A., Valerio, R., Llanos, J., Fradinho, J., Serra, S., Reis, M. A. M., … Velizarov, S. (2011). Arsenic removal from drinking water through a hybrid ion exchange membrane - Coagulation process. Separation and Purification Technology, 83(1), 137–143. doi: 10.1016/j.seppur.2011.09.027
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Salgado, R., Marques, R., Noronha, J. P., Mexia, J. T., Carvalho, G., Oehmen, A., & Reis, M. A. M. (2011). Assessing the diurnal variability of pharmaceutical and personal care products in a full-scale activated sludge plant. Environmental Pollution 159, 10: 2359-2367, 159(10), 2359–2367. doi: 10.1016/j.envpol.2011.07.004
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Salgado, R., Marques, R., Noronha, J. P., Carvalho, G., Oehmen, A., & Reis, M. A. M. (2012). Assessing the removal of pharmaceuticals and personal care products in a full-scale activated sludge plant. Environmental Science and Pollution Research International, 19(5), 1818–1827. doi: 10.1007/s11356-011-0693-z
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Galinha, C. F., Carvalho, G., Portugal, C. A. M., Guglielmi, G., Reis, M. A. M., & Crespo, J. G. (2012). Multivariate statistically-based modelling of a membrane bioreactor for wastewater treatment using 2D fluorescence monitoring data. Water Research, 46(11), 3623–3636. doi: 10.1016/j.watres.2012.04.010
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Silva, A. F., Carvalho, G., Oehmen, A., Lousada-Ferreira, M., Van Nieuwenhuijzen, A., Reis, M. A. M., & Crespo, M. T. B. (2012). Microbial population analysis of nutrient removal-related organisms in membrane bioreactors. Applied Microbiology and Biotechnology, 93(5), 2171–2180. doi: 10.1007/s00253-011-3499-5
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Albuquerque, M. G. E., Carvalho, G., Kragelund, C., Silva, A. F., Barreto Crespo, M. T., Reis, M. A. M., & Nielsen, P. H. (2013). Link between microbial composition and carbon substrate-uptake preferences in a PHA-storing community. The ISME Journal, 7(1), 1–12. doi: 10.1038/ismej.2012.74
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Almeida, B., Oehmen, A., Marques, R., Brito, D., Carvalho, G., & Barreto Crespo, M. T. (2013). Modelling the biodegradation of non-steroidal anti-inflammatory drugs (NSAIDs) by activated sludge and a pure culture. Bioresource Technology, 133, 31–37. doi: 10.1016/j.biortech.2013.01.035
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Carvalho, M., Roca, C. , Reis, M.A.M. Carob pod water extracts as feedstock for succinic acid production by Actinobacillus succinogenes 130Z. Bioresource Technology Volume 170, Pages 491-498, 2014.
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Freitas, F. , Alves, V.D. Gouveia, A.R., Pinheiro, C. Torres, C.A.V., Grandfils, C., Reis, M.A.M. Controlled production of exopolysaccharides from enterobacter A47 as a function of carbon source with demonstration of their film and emulsifying abilities. Applied Biochemistry and Biotechnology, Volume 172, Issue 2, Pages 641-657, 2014
- Oehmen, A. , Vergel, D., Fradinho, J., Reis, M.A.M., Crespo, J.G., Velizarov, S. Mercury removal from water streams through the ion exchange membrane bioreactor concept,Journal of Hazardous Materials. Vol. 264, 15, 65-70,2014
- Carvalho, M., Matos, M., Roca, C. , Reis, M.A.M. Succinic acid production from glycerol by Actinobacillus succinogenes using dimethylsulfoxide as electron acceptor New Biotechnology, Volume 31, Issue 1, Pages 133-139, 2014.
- Fradinho, J.C., Oehmen, A., Reis, M.A.M.. Photosynthetic mixed culture polyhydroxyalkanoate (PHA) production from individual and mixed volatile fatty acids (VFAs): Substrate preferences and co-substrate uptake. Journal of Biotechnolgy, Vol. 185, Pages 19-27,2014.
- CARVALHEIRA M, OEHMEN A, CARVALHO G, REIS MAM. The effect of substrate competition on the metabolism of polyphosphate accumulating organisms (PAOs). Water Research 64: 149-159,2014. doi: 10.1016/j.watres.2014.07.004.
- LANHAM AB, OEHMEN A, SAUNDERS AM, CARVALHO G, NIELSEN PH, REIS MAM. Metabolic modelling of full-scale enhanced biological phosphorus removal sludge. Water Research 66: 283-295,2014. doi: 10.1016/j.watres.2014.08.036
- CARVALHEIRA M, OEHMEN A, CARVALHO G, EUSEBIO M, REIS MAM. The impact of aeration on the competition between polyphosphate accumulating organisms and glycogen accumulating organisms. Water Research 66: 296-307, 2014. doi: 10.1016/j.watres.2014.08.033.
- CARVALHEIRA M, OEHMEN A, CARVALHO G, REIS MAM. Survival strategies of polyphosphate accumulating organisms and glycogen accumulating organisms under conditions of low organic loading. Bioresource Technology 172: 290-296, 2014. doi: 10.1016/j.biortech.2014.09.059.
- Carvalheira, M., Oehmen, A. , Carvalho, G., Reis, M.A.M. 2014. The effect of substrate competition on the metabolism of polyphosphate accumulating organisms (PAOs). Water Research, Volume 64, 1, 149-159,2014.
- Castro-Mayorga, J.L.a, Martínez-Abad, A.a, Fabra, M.J.a, Olivera, C.b, Reis, M.b, Lagarón, J.M. Stabilization of antimicrobial silver nanoparticles by a polyhydroxyalkanoate obtained from mixed bacterial culture. International Journal of Biological Macromolecules, 71, pp. 103-110, 2014.
- ROCA C, ALVES VD, FREITAS F., REIS MAM. Exopolysaccharides enriched in rare sugars: bacterial sources, production and applications. Front Microbiol 6:288, 2014. (doi: 10.3389/fmicb.2015.00288)
- CRUZ MV, SARRAGUÇA MC, FREITAS F, LOPES JA, REIS MAM. Online monitoring of P(3HB) produced from used cooking oil with near-infrared spectroscopy. Jounal of Biotechnol 194, 1-9,2014. (doi: 10.1016/j.jbiotec.2014.11.022)
- DHADGE VL, MORGADO PI, FREITAS F, REIS MA, AZEVEDO A, AIRES-BARROS R, ROQUE ACA. An extracellular polymer at the interface of magnetic bioseparations. J Royal Soc - Interface 11, 2014.(doi: 10.1098/rsif.2014.0743)
- MORAIS C, FREITAS F, CRUZ MV, PAIVA A, DIONÍSIO M, REIS MAM. Conversion of fat-containing waste from the margarine manufacturing process into bacterial polyhydroxyalkanoates. Int J Biol Macromol 71, 68–73, 2014. (doi: 10.1016/j.ijbiomac.2014.04.044)
- TORRES CAV, MARQUES R, FERREIRA AR, ANTUNES S, FREITAS F*, GRANDFILS C, REIS MAM. Impact of glycerol and nitrogen concentration on Enterobacter A47 growth and exopolysaccharide production. Int J Biol Macromol 71, 81-86, 2014. (doi: 10.1016/j.ijbiomac.2014.04.012)
- FERREIRA ARV, TORRES CAV, FREITAS F, REIS MAM, ALVES VD, COELHOSO IM Biodegradable films produced from the bacterial polysaccharide FucoPol. Int J Biol Macromol 71, 111-116, 2014. (doi: 10.1016/j.ijbiomac.2014.04.022)
- MARTINO L, CRUZ MV, SCOMA A, FREITAS F, BERTIN L, SCANDOLA M, REIS MAM. Recovery of amorphous polyhydroxybutyrate granules from Cupriavidus necator cells grown on used cooking oil. Int J Biol Macromol 71, 117-123, 2014. (doi: 10.1016/j.ijbiomac.2014.04.016)
- CHAGAS B, FARINHA I, GALINHA CF, FREITAS F, REIS MAM. Chitin–glucan complex production by Komagataella (Pichia) pastoris: impact of cultivation pH and temperature on polymer content and composition. New Biotechnol 31(5), 468-474, 2014. (doi: 10.1016/j.nbt.2014.06.005)
- DINIZ MS, SALGADO R, PEREIRA VJ, CARVALHO G, OEHMEN A, REIS MAM, NORONHA JP. Ecotoxicity of ketoprofen, diclofenac, atenolol and their photolysis byproducts in zebrafish (Danio rerio). Science of the Total Environment 505: 282-289, 2015. doi: 10.1016/j.scitotenv.2014.09.103.
- MESQUITA DP, AMARAL AL, LEAL C, OEHMEN A, REIS MAM, FERREIRA EC. Polyhydroxyalkanoate granules quantification in mixed microbial cultures using image analysis: Sudan Black B versus Nile Blue A staining. Analytica Chimica Acta 865: 8-15, 2015. doi: 10.1016/j.aca.2015.01.018.
- MARQUES R, OEHMEN A, CARVALHO G, REIS MAM. Modelling the biodegradation kinetics of the herbicide propanil and its metabolite 3,4-dichloroaniline. Environmental Science and Pollution Research 22: 6687-6695, 2015. doi: 10.1007/s11356-014-3870-z
- ANTUNES, S., FREITAS, F., ALVES, V.D., GRANDFILS, C., REIS, M.A.M. Conversion of cheese whey into a fucose- and glucuronic acid-rich extracellular polysaccharide by Enterobacter A47. Journal of Biotechnology, 210, pp. 1-7, 2015.
- CRISTIANA A.V. TORRESA, ANA R.V. FERREIRA, FILOMENA FREITAS, MARIA A.M. REIS, ISABEL COELHOSO, VÍTOR D. ALVES. Rheological studies of the fucose-rich exopolysaccharide FucoPol.International Journal of Biological Macromolecules , 79, pp. 611-617, 2015.
- FARINHA, I., DUARTE, P., PIMENTEL, A., (...), FORTUNATO, E., REIS, M.A.M. Chitin-glucan complex production by Komagataella pastoris: Downstream optimization and product characterization. Carbohydrate Polymers,130, pp. 455-464, 2015.
- Fava, F., Totaro, G., Diels, L., Reis, M., Duarte, J., Carioca, O.B., Poggi-Varaldo, H.M., Ferreira, B.S.. Biowaste biorefinery in Europe: opportunities and research & development needs . New Biotechnology 32 (1), pp. 100-108, 2015.
- ROCA, C., ALVES, V.D., FREITAS, F., REIS, M.A.M. Exopolysaccharides enriched in rare sugars: Bacterial sources, production, and applications. Frontiers in Microbiology, 6 (APR), 288, 2015.
- CRUZ, M.V., SARRAGUÇA, M.C., FREITAS, F., LOPES, J.A., REIS, M.A.M. Online monitoring of P(3HB) produced from used cooking oil with near-infrared spectroscopy. Journal of Biotechnology,194, pp. 1-9, 2015
- MARTÍNEZ-ABAD, L. CABEDO, C. S. S. OLIVEIRA, L. HILLIOU, M. REIS AND J. M. LAGARÓN Characterization of polyhydroxyalkanoate blends incorporating unpurified biosustainably produced poly(3-hydroxybutyrate-co-3-hydroxyvalerate. Journal of Applied Polymer Science. Vol.133, 2016.
- HILLIOU, L., MACHADO, D., OLIVEIRA, C.S.S., (...), VILLANO, M., MAJONE, M. REIS, MAM. Impact of fermentation residues on the thermal, structural, and rheological properties of polyhydroxy(butyrate-co-valerate) produced from cheese whey and olive oil mill wastewater, Journal of Applied Polymer Science, 128, 269-277, 2016.
- Cruz, M.V., Freitas, F., Paiva, A., (...), Ramos, A.M., Reis, M.A.M.. Valorization of fatty acids-containing wastes and byproducts into short- and medium-chain length polyhydroxyalkanoates, New Biotechnology,33 (1), pp. 206-215, 2016.
- PAIS, J., SERAFIM, L.S., FREITAS, F., REIS, M.A.M.Conversion of cheese whey into poly(3-hydroxybutyrate-co-3-hydroxyvalerate) by Haloferax mediterranei. New Biotechnology, 33 (1), 224-230, 2016.
- MARTÍNEZ-SANZ, M., LOPEZ-RUBIO, A., VILLANO, M., (...), REIS, M., LAGARON, J.M. Production of bacterial nanobiocomposites of polyhydroxyalkanoates derived from waste and bacterial nanocellulose by the electrospinning enabling melt compounding method. Journal of Applied Polymer Science. 133 (2), 42633, 2016.
- COLOMBO BIANCA , PEPÈ SCIARRIA TOMMY , REIS MARIA , SCAGLIA BARBARA , ADANI FABRIZIO . Polyhydroxyalkanoates (PHAs) production from fermented cheese whey by using a mixed microbial culture. Bioresource Tecnhology, 218 (2016) 692–699, 2016
- SILVA AF, ANTUNES S, SAUNDERS A, FREITAS F, VIEIRA A, CRESPO MTB, CARVALHO G (2016) Impact of sludge retention time on the fine composition of the microbial community and extracellular polymeric substances in a membrane bioreactor. Appl Microbiol Biotechnol 100, 8507-8521 (doi: 10.1007/s00253-016-7617-2)
- ARAÚJO D, ALVES VD, CAMPOS J, COELHOSO I, SEVRIN C, GRANDFILS C, FREITAS F, REIS MAM (2016) Assessment of the adhesive properties of the bacterial polysaccharide FucoPol. Int J Biol Macromol 92, 383-9 (DOI: 10.1016/j.ijbiomac.2016.07.035)
- FERREIRA ARV, TORRES CAV, FREITAS F, SEVRIN C, GRANDFILS C, REIS MAM, ALVES VD (2016) Development and characterization of bilayer films of FucoPol and chitosan. Carbohydr Pol 147, 8-15 (doi: 10.1016/j.carbpol.2016.03.089)
- ROCA C, LEHMANN M, BAPTISTA S, TORRES CAV, GAUDÊNCIO SP, FREITAS F, REIS MAM (2016) Exopolysaccharide production by a marine Pseudoalteromonas sp. strain isolated from Madeira Archipelago ocean sediments. New Biotechnol 33(4), 460-466 (doi: 10.1016/j.nbt.2016.02.005)