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2004
Clares, MP, Aguilar J, Aucejo R, Lodeiro C, Albelda MT, Pina F, Lima JC, Parola AJ, Pina J, de Melo JS, Soriano C, Garcia-Espana E.  2004.  Synthesis and H+, Cu2+, and Zn2+ coordination behavior of a bis(fluorophoric) bibrachial lariat aza-crown, 2004. Inorganic Chemistry. 43:6114-6122. Abstract

The synthesis, protonation behavior, and Cu2+ and Zn2+ coordination chemistry of the novel bibrachial aza lariat ether (naphthalen-1-ylmethyl)[2-(20-{2-[(naphthalen-1-ylmethyl)amino]ethyl}-3,6,9,17,20,23,29,30-octaazatricyclo-[23.3.1.1*11,15*]triaconta-1(29),11(30),12,14,25,27-hexaen-6-yl)ethyl]amine (L) are discussed. The macrocycle, which has two aminoethyl naphthyl moieties symmetrically appended to a 2:2 azapyridinophane structure, displays, in the pH range 2-11, six protonation steps that correspond to the protonation of the secondary amino groups. Steady-state fluorescence measurements show emissions due to the monomer and to the excimer formed between the two naphthalene fragments of the macrocycle. The time-resolved fluorescence data, obtained by the time-correlated single photon counting technique, show that a significant percentage of excimer is preformed as ground-state dimers. The ligand L forms with the metal ions Cu2+ and Zn2+ mono- and dinuclear complexes in aqueous solution. The influence of metal coordination in the fluorescence emission of L is analyzed. The acid-base, coordination capabilities, and emissive behavior of L are compared with those presented by its synthetic precursor L1, which has a tripodal tris(2-aminoethyl)amine structure functionalized at one of its terminal amino groups with a naphthyl moiety.

Pina, F, Lima JC, Parola AJ, Afonso CAM.  2004.  Thermal and photochemical properties of 4 ',7-dihydroxyflavylium in water-ionic liquid biphasic systems: A write-read-erase molecular switch, 2004. Angewandte Chemie-International Edition. 43:1525-1527. Abstract
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Fernandez, D, Parola AJ, Branco LC, Afonso CAM, Pina F.  2004.  Thermal and photochemical properties of 4 '-hydroxyflavylium in water-ionic liquid biphasic systems, 2004. Journal of Photochemistry and Photobiology a-Chemistry. 168:185-189. Abstract

The multistate/multifunctional properties of 4'-hydroxyflavylium in a water/ I -n-butyl-3 -methyl-imidazolium hexalluorophosphate (fbmim][PF6]) biphasic system are described. The kinetics and thermodynamics of this flavylium salt have been fully characterised in aqueous solutions and compared to those obtained in [bmim][PF6]. The trans-chalcone is thermally more stable in the ionic liquid but shows efficient photoisomerisation to the cis-chalcone, allowing to define write-read-erase cycles in this biphasic system. (C) 2004 Elsevier B.V. All rights reserved.

Moncada, MC, Pina F, Roque A, Parola AJ, Maestri M, Balzani V.  2004.  Tuning the photochromic properties of a flavylium compound by pH, 2004. European Journal of Organic Chemistry. :304-312. Abstract

We studied the intricate pH- and light-dependent network of the thermal and photochemical reactions of the 4'-(dimethylamino) -7-hydroxyflavylium ion by continuous irradiation, flash photolysis, H-1 NMR spectroscopy, and stopped flow analysis. The distribution of the various forms at the pH-dependent thermodynamic equilibrium and the rates of several interconversion processes were measured. The most interesting feature of this multistate/multifunctional system is related to the possibility of pH-tuning the colour change caused by photoirradiation, because the cis-chalcone isomer, obtained from the photoisomerization of the trans-chalcone form, is spontaneously transformed into coloured species (flavylium. cation and quinoidal base) at low values of pH, but reverts back to the uncoloured trans-chalcone at high values of pH because of the low energy barrier between the cis and trans chalcone isomers. ((C) Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2004).

Fernandez, D, Folgosa F, Parola AJ, Pina F.  2004.  Two coupled photochromic systems of 3 ',4 '-(methylenedioxy)flavylium: kinetic and thermodynamic characterization, 2004. New Journal of Chemistry. 28:1221-1226. Abstract

The chemistry and photochemistry of 3',4'-(methylenedioxy)flavylium was studied by means of UV-Vis spectrophotometry, H-1 NMR, stopped flow, and continuous irradiation, in acidic and basic aqueous solutions. Six species were identified: the flavylium cation, AH(+); the hemiketal, B; the cis- and the trans-chalcones, Cc and Ct, and their ionized forms, Cc(-) and Ct(-). These species de. ne a multiequilibria network whose kinetics and thermodynamics were completely characterized. The two pairs of chalcones de. ne two coupled photochromic systems, respectively in acidic and basic media, both allowing cycles capable of writing, reading and erasing to be defined.

2005
Giestas, L, Folgosa F, Lima JC, Parola AJ, Pina F.  2005.  Bio-inspired multistate networks responsive to light, pH and thermal inputs - An example of a multistate system operating through different algorithms. European Journal of Organic Chemistry. :4187-4200., Number 19 Abstract
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Kuhn, FE, Zhao J, Abrantes M, Sun W, Afonso CAM, Branco LC, Goncalves IS, Pillinger M, Romao CC.  2005.  Catalytic olefin epoxidation with cyclopentadienyl-molybdenum complexes in room temperature ionic liquids. Tetrahedron Letters. 46:47-52., Number 1 Abstract
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da Silva, PF, Lima JC, Freitas AA, Shimizu K, Macanita AL, Quina FH.  2005.  Charge-transfer complexation as a general phenomenon in the copigmentation of anthocyanins. Journal of Physical Chemistry a. 109:7329-7338., Number 32 Abstract
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Branco, LC, Serbanovic A, da Ponte MN, Afonso CAM.  2005.  Clean osmium-catalyzed asymmetric dihydroxylation of olefins in ionic liquids and supercritical CO2 product recovery. Chemical Communications. :107-109., Number 1 Abstract
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Noronha, MC, Lima JC, Santos H, Macanita AL.  2005.  The discrimination of tyrosine residues in ribonuclease A by picosecond time-resolved fluorescence spectroscopy. Febs Journal. 272:382. Abstract
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Gago, S, Fernandes JA, Rainho JP, Ferreira RAS, Pillinger M, Valente AA, Santos TM, Carlos LD, Ribeiro-Claro PJA, Goncalves IS.  2005.  Highly luminescent tris(beta-diketonate)europium(III) complexes immobilized in a functionalized mesoporous silica. Chemistry of Materials. 17:5077-5084., Number 20 Abstract
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Gago, S, Pillinger M, Ferreira RAS, Carlos LD, Santos TM, Goncalves IS.  2005.  Immobilization of lanthanide ions in a pillared layered double hydroxide. Chemistry of Materials. 17:5803-5809., Number 23 Abstract
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Aucejo, R, Alarcon J, Garcia-Espana E, Llinares JM, Marchin KL, Soriano C, Lodeiro C, Bernardo MA, Pina F, Pina J, de Melo JS.  2005.  A new Zn-II tweezer pyridine-naphthalene system - An off-on-off system working in a biological pH window. European Journal of Inorganic Chemistry. :4301-4308., Number 21 Abstract
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Schafer, T, Branco LC, Fortunato R, Izak P, Rodrigues CM, Afonso CAM, Crespo JG.  2005.  Opportunities for membrane separation processes using ionic liquids. Ionic Liquids Iiib: Fundamentals, Progress, Challenges and Opportunities: Transformations and Processes. 902(Rogers, R. D., Seddon, K. R., Eds.).:97-110. Abstract
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Serbanovic, A, Branco LC, da Ponte MN, Afonso CAM.  2005.  Osmium catalyzed asymmetric dihydroxylation of methyl trans-cinnamate in ionic liquids, followed by supercritical CO2 product recovery. Journal of Organometallic Chemistry. 690:3600-3608., Number 15 Abstract
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Costa, T, Miguel MG, Lindman B, Schillen K, Lima JC, de Melo JS.  2005.  Self-assembly of a hydrophobically modified naphthalene-labeled poly(acrylic acid) polyelectrolyte in water: Organic solvent mixtures followed by steady-state and time-resolved fluorescence. Journal of Physical Chemistry B. 109:3243-3251., Number 8 Abstract
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Gago, S, Rodriguez-Borges JE, Teixeira C, Santos AM, Zhao J, Pillinger M, Nunes CD, Petrovski Z, Santos TM, Kuhn FE, Romao CC, Goncalves IS.  2005.  Synthesis, characterization and catalytic studies of bis(chloro)dioxomolybdenum(VI)-chiral diimine complexes. Journal of Molecular Catalysis a-Chemical. 236:1-6., Number 1-2 Abstract
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Galindo, F, Lima JC, Luis SV, Parola AJ, Pina F.  2005.  Write-read-erase molecular-switching system trapped in a polymer hydrogel matrix. Advanced Functional Materials. 15:541-545., Number 4 Abstract
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Bazzicalupi, C, Bencini A, Bianchi A, Danesi A, Giorgi C, Lodeiro C, Pina F, Santarelli S, Valtancoli B.  2005.  A zinc(II)-based receptor for ATP binding and hydrolysis. Chemical Communications. :2630-2632., Number 20 Abstract
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Pina, J, de Melo JS, Pina F, Lodeiro C, Lima JC, Parola AJ, Soriano C, Clares MP, Albelda MT, Aucejo R, Garcia-Espana E.  2005.  Spectroscopy and coordination chemistry bisnaphthalene-bisphenanthroline ligand of a new displaying a sensing ability for metal cations, 2005. Inorganic Chemistry. 44:7449-7458. Abstract

A new fluorescent macrocyclic structure (0) bearing two naphthalene units at both ends of a cyclic polyaminic chain containing two phenanthroline units was investigated with potentiometric and fluorescence (steady-state and time-resolved) techniques. The fluorescence emission spectra show the simultaneous presence of three bands: a short wavelength emission band (naphthalene monomer), a middle emission band (phenanthroline emission), and a long-wavelength band. All three bands were found to be dependent on the protonation state of the macrocyclic unit (including the polyaminic and phenanthroline structures). The existence of the long-wavelength emission band is discussed and is shown to imply that a bending movement involving the two phenanthroline units leads to excimer formation. This is determined by comparison with the excimer emission formed by intermolecular association of 1,10-phenanthroline. With ligand L1, excimer formation occurs only at pH values above 4. At very acidic pH values, the protonation of the polyamine bridges is extensive leading to a rigidity of the system that precludes the bending movement. The interaction with metal cations Zn(II) and Cu(II) was also investigated. Excimer formation is, in these situations, increased with Zn(II) and decreased with Cu(II). The long-emission band is shown to present a different wavelength maximum, depending on the metal, which can be considered as a characteristic to validate the use of ligand L1 as a sensor for a given metal.

Galindo, F, Lima JC, Luis SV, Melo MJ, Parola AJ, Pina F.  2005.  Water/humidity and ammonia sensor, based on a polymer hydrogel matrix containing a fluorescent flavylium compound, 2005. Journal of Materials Chemistry. 15:2840-2847. Abstract

Flavylium compounds can conveniently be encapsulated in water permeable cross-linked poly(2-hydroxyethyl methacrylate) ( PHEMA) polymer hydrogel matrices. The polymer is also permeable to gases, for example ammonia and hydrogen chloride. The ability of the polymer to concentrate water from the surrounding atmosphere was demonstrated. The absorption and emission spectra of the encapsulated flavylium compounds are very dependent on the pH, and by consequence ammonia ( or hydrogen chloride) can be easily detected. The intensity of the fluorescence emission of the flavylium cation (AH+ species obtained in acidic media) is very dependent on the water content due to the efficient excited state proton transfer involving the AH(+)* excited state and water. The combination of flavylium emission sensitivity to water and ability of the polymer to concentrate water from the surrounding atmosphere, confers this material potential utility as a humidity sensor with high sensitivity.

2006
Portugal, CAM, Crespo JG, Lima JC.  2006.  Anomalous "unquenching" of the fluorescence decay times of beta-lactoglobulin induced by the known quencher acrylamide. Journal of Photochemistry and Photobiology B-Biology. 82:117-126., Number 2 Abstract
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Bazzicalupi, C, Bencini A, Bianchi A, Borsari L, Danesi A, Giorgi C, Lodeiro C, Mariani P, Pina F, Santarelli S, Tamayo A, Valtancoli B.  2006.  Basicity and coordination properties of a new phenanthroline-based bis- macrocyclic receptor. Dalton Transactions. :4000-4010., Number 33 Abstract
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Braga, SS, Gago S, Seixas JD, Valente AA, Pillinger M, Santos TM, Goncalves IS, Romao CC.  2006.  beta-cyclodextrin and permethylated beta-cyclodextrin inclusion compounds of a cyclopentadienyl molybdenum tricarbonyl complex and their use as cyclooctene epoxidation catalyst precursors. Inorganica Chimica Acta. 359:4757-4764., Number 15 Abstract
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