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Dajkovic, A, Tesson B, Chauhan S, Courtin P, Keary R, Flores P, Marliere C, Filipe SR, Chapot-Chartier M-P, Carballido-Lopez R.  2017.  Hydrolysis of Peptidoglycan is Modulated by Amidation of meso-Diaminopimelic Acid and Mg2+ in Bacillus subtilis. Mol. Microbiol. 104:972-988.
Vaz, F, Covas G, Pinho MG, Filipe SR.  2016.  Analysis of cell wall teichoic acids in Staphylococcus aureus. Methods Mol. Biol. 1440:201-13.
Gravato-Nobre, MJ, Vaz F, Filipe S, Chalmers R, Hodgkin J.  2016.  The invertebrate lysozyme effector ILYS-3 is systemically activated in response to danger signals and confers antimicrobial protection in C. elegans. PLoS Pathogens. 15:e1005826.
Monteiro, JM, Fernandes PB, Vaz F, Pereira AR, Tavares AC, Ferreira MT, Pereira PM, Veiga H, Kuru E, VanNieuwenhze M, Brun YV, Filipe SR, Pinho MG.  2015.  Cell shape dynamics during the staphylococci cell cycle. Nat. Commun. 6:8055.
Carvalho, F, Atilano ML, Pombinho R, Covas G, Gallo RL, Filipe SR, Sousa S, Cabanes D.  2015.  L-Rhamnosylation of Listeria monocytogenes wall teichoic acids promotes resistance to antimicrobial peptides by delaying interaction with the membrane. PLoS Pathogens. 11:e1004919.
Greene, NG, Narciso AR, Filipe SR, Camilli A.  2015.  Peptidoglycan branched stem peptides contribute to Streptococcus pneumoniae virulence by inhibiting pneumolysin release. PLoS Pathogens. 11:e1004996.
Reed, P, Atilano ML, Alves R, Hoiczyk E, Sher X, Reichmann NT, Pereira PM, Roemer T, Filipe SR, Pereira-Leal JB, Ligoxygakis P, Pinho MG.  2015.  Staphylococcus aureus survives with a minimal peptidoglycan synthesis machinery but sacrifices virulence and antibiotic resistance. PLoS Pathogens. 11:e1004891.
Atilano, ML, Pereira PM, Vaz F, Catalão MJ, Reed P, Grilo IR, Sobral RG, Ligoxygakis P, Pinho MG, Filipe SR.  2014.  Bacterial autolysins trim cell surface peptidoglycan to prevent detection by the Drosophila innate immune system. eLife. 3:e02277.
Rueff, A-S, Chastanet A, Dominguez-Escobar J, Yao Z, Yates J, Prejean M-V, Delumeau O, P. Noirot, Wedlich-Soldner R, Filipe SR, Carballido-Lopez R.  2014.  An early cytoplasmic step of peptidoglycan synthesis is associated to MreB in Bacillus subtilis. Mol. Microbiol. 91:348-362.
Catalao, MJ, Figueiredo J, Henriques MX, Gomes JP, Filipe SR.  2014.  Optimization of fluorescent tools for cell biology studies in Gram-positive bacteria. PLoS One. 9:e113796.
Henriques, MX, Catalão MJ, Figueiredo J, Gomes JP, Filipe SR.  2013.  Construction of improved tools for protein localization studies in Streptococcus pneumoniae. PLoS One. 8:e55049.
Thorsing, M, Klitgaard JK, Atilano ML, Skov MN, Kolmos HJ, Filipe SR, Kallipolitis BH.  2013.  Thioridazine induces major changes in global gene expression and cell wall composition in methicillin-resistant Staphylococcus aureus USA300. PLoS One. 8:e64518.
Henriques, MX, Rodrigues T, Carido M, Ferreira L, Filipe SR.  2011.  Synthesis of capsular polysaccharide at the division septum of Streptococcus pneumoniae is dependent on a bacterial tyrosine kinase. Mol. Microbiol. 82:515-534.
Atilano, ML, Yates J, Glittenberg M, Filipe* SR, Ligoxygakis* P.  2011.  Wall teichoic acids of Staphylococcus aureus limit recognition by the Drosophila Peptidoglycan Recognition Protein-SA to promote pathogenicity. PLoS Pathogens. 7:e1002421.
Atilano, ML, Pereira PM, Yates J, Reed P, Veiga H, Pinho* MG, Filipe* SR.  2010.  Teichoic acids are temporal and spatial regulators of peptidoglycan cross-linking in Staphylococcus aureus. Proc. Natl. Acad. Sci. USA. 107:18991-18996.
Wang, L, Gilbert RJC, Atilano ML, Filipe SR, Gay NJ, Ligoxygakis P.  2008.  Peptidoglycan Recognition Protein-SD provides versatility of receptor formation in Drosophila immunity. Proc. Natl. Acad. Sci. USA. 105:11881-11886.
Memmi, G, Filipe SR, Pinho MG, Fu Z, Cheung A.  2008.  Staphylococcus aureus PBP4 is essential for beta-lactams resistance in community-acquired methicillin resistant strains. Antimicrob Agents Chemother. 52:3955-3966.
Pereira, PM, Filipe SR, Tomasz A, Pinho MG.  2007.  Fluorescence ratio imaging microscopy shows decreased access of vancomycin to cell wall synthetic sites in vancomycin-resistant Staphylococcus aureus. Antimicrob Agents Chemother. 51:3627-3633.
Payne, BT, van Knippenberg IC, Bell H, Filipe SR, Sherratt DJ, McGlynn P.  2006.  Replication fork blockage by transcription factor—DNA complexes in Escherichia coli. Nucleic Acids Res. 2006:5194-5202.
Wang, L, Weber AN, Atilano ML, Filipe SR, Gay NJ, Ligoxygakis P.  2006.  Sensing of Gram-positive bacteria in Drosophila: GNBP1 is needed to process and present peptidoglycan to PGRP-SA. EMBO J. 25:5005-5014.
Possoz*, C, Filipe* SR, Grainge I, Sherratt DJ.  2006.  Tracking of controlled Escherichia coli replication fork stalling and restart at repressor-bound DNA in vivo. EMBO J. 25:2596-2604.
Filipe, SR, Tomasz A, Ligoxygakis P.  2005.  Requirements of peptidoglycan structure allowing detection by the Drosophila Toll pathway. EMBO Reports. 6:327-333.
Sherratt, DJ, Soballe B, Barre F-X, Filipe SR, Massey T, Lau I, Yates J.  2004.  Recombination and chromosome segregation. Phil. Trans. R. Soc. Lond. B. 359:61-69.
Gardete, S, Ludovice AM, Sobral RG, Filipe SR, de Lencastre H, Tomasz A.  2004.  The role of murE in the expression of b-lactam antibiotic resistance in Staphylococcus aureus. J. Bacteriol. 186:1705-1713.